Protein–RNA interactions for Protein: O60813

PRAMEF11, PRAME family member 11, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF11O60813 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
PRAMEF11O60813 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC17.55■□□□□ 0.4
PRAMEF11O60813 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
PRAMEF11O60813 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
PRAMEF11O60813 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PRAMEF11O60813 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
PRAMEF11O60813 AP002414.3-201ENST00000589352 1468 ntBASIC17.55■□□□□ 0.4
PRAMEF11O60813 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
PRAMEF11O60813 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC17.55■□□□□ 0.4
PRAMEF11O60813 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC17.55■□□□□ 0.4
PRAMEF11O60813 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC17.55■□□□□ 0.4
PRAMEF11O60813 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PRAMEF11O60813 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC17.54■□□□□ 0.4
PRAMEF11O60813 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
PRAMEF11O60813 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC17.54■□□□□ 0.4
PRAMEF11O60813 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
PRAMEF11O60813 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC17.54■□□□□ 0.4
PRAMEF11O60813 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PRAMEF11O60813 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PRAMEF11O60813 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PRAMEF11O60813 CENPM-204ENST00000402420 688 ntTSL 5 BASIC17.54■□□□□ 0.4
PRAMEF11O60813 NABP1-203ENST00000409510 843 ntTSL 5 BASIC17.54■□□□□ 0.4
PRAMEF11O60813 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
PRAMEF11O60813 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC17.54■□□□□ 0.4
PRAMEF11O60813 AC093909.1-201ENST00000504731 1122 ntBASIC17.54■□□□□ 0.4
PRAMEF11O60813 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
PRAMEF11O60813 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC17.54■□□□□ 0.4
PRAMEF11O60813 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC17.54■□□□□ 0.4
PRAMEF11O60813 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC17.54■□□□□ 0.4
PRAMEF11O60813 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
PRAMEF11O60813 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC17.54■□□□□ 0.4
PRAMEF11O60813 LINC02012-201ENST00000608206 1725 ntBASIC17.54■□□□□ 0.4
PRAMEF11O60813 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PRAMEF11O60813 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
PRAMEF11O60813 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
PRAMEF11O60813 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
PRAMEF11O60813 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC17.53■□□□□ 0.4
PRAMEF11O60813 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PRAMEF11O60813 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PRAMEF11O60813 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PRAMEF11O60813 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
PRAMEF11O60813 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
PRAMEF11O60813 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
PRAMEF11O60813 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
PRAMEF11O60813 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PRAMEF11O60813 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
PRAMEF11O60813 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PRAMEF11O60813 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
PRAMEF11O60813 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
PRAMEF11O60813 FZD10-202ENST00000539839 3282 ntBASIC17.53■□□□□ 0.4
PRAMEF11O60813 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PRAMEF11O60813 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
PRAMEF11O60813 PTCHD3P3-201ENST00000403073 906 ntBASIC17.53■□□□□ 0.4
PRAMEF11O60813 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC17.53■□□□□ 0.4
PRAMEF11O60813 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC17.53■□□□□ 0.4
PRAMEF11O60813 RPS29-206ENST00000557111 488 ntTSL 2 BASIC17.53■□□□□ 0.4
PRAMEF11O60813 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC17.53■□□□□ 0.4
PRAMEF11O60813 LITAF-211ENST00000572255 516 ntTSL 4 BASIC17.53■□□□□ 0.4
PRAMEF11O60813 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC17.53■□□□□ 0.4
PRAMEF11O60813 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC17.53■□□□□ 0.4
PRAMEF11O60813 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC17.53■□□□□ 0.4
PRAMEF11O60813 AL356488.2-201ENST00000602755 427 ntBASIC17.53■□□□□ 0.4
PRAMEF11O60813 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC17.53■□□□□ 0.4
PRAMEF11O60813 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC17.53■□□□□ 0.4
PRAMEF11O60813 AL805961.1-202ENST00000641562 540 ntBASIC17.53■□□□□ 0.4
PRAMEF11O60813 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PRAMEF11O60813 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC17.53■□□□□ 0.4
PRAMEF11O60813 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
PRAMEF11O60813 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PRAMEF11O60813 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC17.53■□□□□ 0.4
PRAMEF11O60813 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
PRAMEF11O60813 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PRAMEF11O60813 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
PRAMEF11O60813 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
PRAMEF11O60813 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
PRAMEF11O60813 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
PRAMEF11O60813 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC17.53■□□□□ 0.4
PRAMEF11O60813 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC17.53■□□□□ 0.4
PRAMEF11O60813 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC17.53■□□□□ 0.4
PRAMEF11O60813 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
PRAMEF11O60813 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
PRAMEF11O60813 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC17.52■□□□□ 0.4
PRAMEF11O60813 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
PRAMEF11O60813 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.4
PRAMEF11O60813 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
PRAMEF11O60813 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
PRAMEF11O60813 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
PRAMEF11O60813 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
PRAMEF11O60813 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
PRAMEF11O60813 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
PRAMEF11O60813 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
PRAMEF11O60813 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
PRAMEF11O60813 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
PRAMEF11O60813 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
PRAMEF11O60813 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
PRAMEF11O60813 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC17.52■□□□□ 0.4
PRAMEF11O60813 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC17.52■□□□□ 0.4
PRAMEF11O60813 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
PRAMEF11O60813 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
PRAMEF11O60813 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC17.52■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 47.4 ms