Protein–RNA interactions for Protein: O60232

SSSCA1, Sjoegren syndrome/scleroderma autoantigen 1, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1O60232 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
SSSCA1O60232 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC14.18□□□□□ -0.14
SSSCA1O60232 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
SSSCA1O60232 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
SSSCA1O60232 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SSSCA1O60232 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SSSCA1O60232 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC14.18□□□□□ -0.14
SSSCA1O60232 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC14.18□□□□□ -0.14
SSSCA1O60232 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC14.18□□□□□ -0.14
SSSCA1O60232 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
SSSCA1O60232 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
SSSCA1O60232 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
SSSCA1O60232 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
SSSCA1O60232 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC14.18□□□□□ -0.14
SSSCA1O60232 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SSSCA1O60232 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SSSCA1O60232 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
SSSCA1O60232 HLA-L-209ENST00000420110 1011 ntBASIC14.18□□□□□ -0.14
SSSCA1O60232 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
SSSCA1O60232 KRT18P65-201ENST00000439811 1286 ntBASIC14.18□□□□□ -0.14
SSSCA1O60232 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC14.18□□□□□ -0.14
SSSCA1O60232 SEC1P-202ENST00000473944 940 ntBASIC14.18□□□□□ -0.14
SSSCA1O60232 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC14.18□□□□□ -0.14
SSSCA1O60232 BX088651.1-201ENST00000540551 451 ntBASIC14.18□□□□□ -0.14
SSSCA1O60232 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
SSSCA1O60232 KRT18P6-201ENST00000555540 1265 ntBASIC14.18□□□□□ -0.14
SSSCA1O60232 AP005242.2-201ENST00000580065 1175 ntBASIC14.18□□□□□ -0.14
SSSCA1O60232 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC14.18□□□□□ -0.14
SSSCA1O60232 AC024243.1-201ENST00000609234 778 ntBASIC14.18□□□□□ -0.14
SSSCA1O60232 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC14.18□□□□□ -0.14
SSSCA1O60232 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
SSSCA1O60232 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SSSCA1O60232 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC14.18□□□□□ -0.14
SSSCA1O60232 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SSSCA1O60232 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
SSSCA1O60232 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
SSSCA1O60232 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SSSCA1O60232 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SSSCA1O60232 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
SSSCA1O60232 PBK-203ENST00000522944 1499 ntTSL 2 BASIC14.18□□□□□ -0.14
SSSCA1O60232 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
SSSCA1O60232 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
SSSCA1O60232 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
SSSCA1O60232 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
SSSCA1O60232 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SSSCA1O60232 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
SSSCA1O60232 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC14.17□□□□□ -0.14
SSSCA1O60232 AC126755.1-201ENST00000525846 6405 ntBASIC14.17□□□□□ -0.14
SSSCA1O60232 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC14.17□□□□□ -0.14
SSSCA1O60232 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SSSCA1O60232 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
SSSCA1O60232 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
SSSCA1O60232 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
SSSCA1O60232 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC14.17□□□□□ -0.14
SSSCA1O60232 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC14.17□□□□□ -0.14
SSSCA1O60232 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC14.17□□□□□ -0.14
SSSCA1O60232 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
SSSCA1O60232 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC14.17□□□□□ -0.14
SSSCA1O60232 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
SSSCA1O60232 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC14.17□□□□□ -0.14
SSSCA1O60232 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC14.17□□□□□ -0.14
SSSCA1O60232 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
SSSCA1O60232 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
SSSCA1O60232 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC14.17□□□□□ -0.14
SSSCA1O60232 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SSSCA1O60232 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
SSSCA1O60232 AC005104.2-201ENST00000427818 678 ntBASIC14.17□□□□□ -0.14
SSSCA1O60232 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC14.17□□□□□ -0.14
SSSCA1O60232 CCR12P-201ENST00000446203 998 ntBASIC14.17□□□□□ -0.14
SSSCA1O60232 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC14.17□□□□□ -0.14
SSSCA1O60232 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
SSSCA1O60232 SPIB-206ENST00000596074 847 ntTSL 2 BASIC14.17□□□□□ -0.14
SSSCA1O60232 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
SSSCA1O60232 REXO1L10P-201ENST00000615707 1290 ntBASIC14.17□□□□□ -0.14
SSSCA1O60232 REXO1L12P-201ENST00000622156 912 ntBASIC14.17□□□□□ -0.14
SSSCA1O60232 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC14.17□□□□□ -0.14
SSSCA1O60232 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
SSSCA1O60232 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
SSSCA1O60232 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC14.17□□□□□ -0.14
SSSCA1O60232 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
SSSCA1O60232 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC14.17□□□□□ -0.14
SSSCA1O60232 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
SSSCA1O60232 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
SSSCA1O60232 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SSSCA1O60232 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SSSCA1O60232 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
SSSCA1O60232 BANP-204ENST00000393208 2283 ntTSL 2 BASIC14.17□□□□□ -0.14
SSSCA1O60232 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SSSCA1O60232 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SSSCA1O60232 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
SSSCA1O60232 AC092068.3-201ENST00000587894 2016 ntBASIC14.17□□□□□ -0.14
SSSCA1O60232 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
SSSCA1O60232 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
SSSCA1O60232 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
SSSCA1O60232 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
SSSCA1O60232 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
SSSCA1O60232 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SSSCA1O60232 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC14.16□□□□□ -0.14
SSSCA1O60232 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
SSSCA1O60232 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms