Protein–RNA interactions for Protein: O15379

HDAC3, Histone deacetylase 3, humanhuman

Predictions only

Length 428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3O15379 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
HDAC3O15379 TMA16-209ENST00000513272 803 ntTSL 2 BASIC16.9■□□□□ 0.3
HDAC3O15379 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC16.9■□□□□ 0.3
HDAC3O15379 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC16.9■□□□□ 0.3
HDAC3O15379 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
HDAC3O15379 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
HDAC3O15379 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC16.9■□□□□ 0.3
HDAC3O15379 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC16.9■□□□□ 0.3
HDAC3O15379 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
HDAC3O15379 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
HDAC3O15379 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
HDAC3O15379 KRT18P22-201ENST00000402024 1347 ntBASIC16.9■□□□□ 0.3
HDAC3O15379 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC16.9■□□□□ 0.3
HDAC3O15379 LTF-203ENST00000426532 2494 ntTSL 2 BASIC16.9■□□□□ 0.3
HDAC3O15379 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
HDAC3O15379 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
HDAC3O15379 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
HDAC3O15379 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC16.9■□□□□ 0.3
HDAC3O15379 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC16.89■□□□□ 0.3
HDAC3O15379 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
HDAC3O15379 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
HDAC3O15379 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
HDAC3O15379 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
HDAC3O15379 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
HDAC3O15379 CICP6-201ENST00000457191 2729 ntBASIC16.89■□□□□ 0.29
HDAC3O15379 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
HDAC3O15379 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
HDAC3O15379 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
HDAC3O15379 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC16.89■□□□□ 0.29
HDAC3O15379 CD70-202ENST00000423145 881 ntTSL 2 BASIC16.89■□□□□ 0.29
HDAC3O15379 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC16.89■□□□□ 0.29
HDAC3O15379 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.29
HDAC3O15379 MIR4497-201ENST00000583208 89 ntBASIC16.89■□□□□ 0.29
HDAC3O15379 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC16.89■□□□□ 0.29
HDAC3O15379 AC019129.2-201ENST00000609837 1235 ntBASIC16.89■□□□□ 0.29
HDAC3O15379 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC16.89■□□□□ 0.29
HDAC3O15379 AL031432.5-201ENST00000641059 760 ntBASIC16.89■□□□□ 0.29
HDAC3O15379 AP006294.2-201ENST00000641667 209 ntBASIC16.89■□□□□ 0.29
HDAC3O15379 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC16.89■□□□□ 0.29
HDAC3O15379 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC16.89■□□□□ 0.29
HDAC3O15379 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
HDAC3O15379 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
HDAC3O15379 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC16.89■□□□□ 0.29
HDAC3O15379 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
HDAC3O15379 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC16.89■□□□□ 0.29
HDAC3O15379 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC16.89■□□□□ 0.29
HDAC3O15379 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
HDAC3O15379 AC026691.1-201ENST00000602502 2017 ntBASIC16.89■□□□□ 0.29
HDAC3O15379 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC16.89■□□□□ 0.29
HDAC3O15379 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC16.89■□□□□ 0.29
HDAC3O15379 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
HDAC3O15379 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC16.89■□□□□ 0.29
HDAC3O15379 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC16.88■□□□□ 0.29
HDAC3O15379 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
HDAC3O15379 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
HDAC3O15379 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
HDAC3O15379 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
HDAC3O15379 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC16.88■□□□□ 0.29
HDAC3O15379 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
HDAC3O15379 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
HDAC3O15379 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC16.88■□□□□ 0.29
HDAC3O15379 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
HDAC3O15379 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
HDAC3O15379 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
HDAC3O15379 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC16.88■□□□□ 0.29
HDAC3O15379 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC16.88■□□□□ 0.29
HDAC3O15379 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
HDAC3O15379 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
HDAC3O15379 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC16.88■□□□□ 0.29
HDAC3O15379 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
HDAC3O15379 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
HDAC3O15379 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
HDAC3O15379 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC16.88■□□□□ 0.29
HDAC3O15379 GPR32P1-201ENST00000601788 811 ntBASIC16.88■□□□□ 0.29
HDAC3O15379 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC16.88■□□□□ 0.29
HDAC3O15379 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
HDAC3O15379 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
HDAC3O15379 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
HDAC3O15379 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
HDAC3O15379 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
HDAC3O15379 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
HDAC3O15379 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC16.88■□□□□ 0.29
HDAC3O15379 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC16.88■□□□□ 0.29
HDAC3O15379 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC16.88■□□□□ 0.29
HDAC3O15379 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC16.88■□□□□ 0.29
HDAC3O15379 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
HDAC3O15379 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
HDAC3O15379 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
HDAC3O15379 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC16.87■□□□□ 0.29
HDAC3O15379 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
HDAC3O15379 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC16.87■□□□□ 0.29
HDAC3O15379 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
HDAC3O15379 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC16.87■□□□□ 0.29
HDAC3O15379 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
HDAC3O15379 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
HDAC3O15379 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC16.87■□□□□ 0.29
HDAC3O15379 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
HDAC3O15379 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
HDAC3O15379 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
HDAC3O15379 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms