Protein–RNA interactions for Protein: O15079

SNPH, Syntaphilin, humanhuman

Predictions only

Length 494 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNPHO15079 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
SNPHO15079 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
SNPHO15079 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SNPHO15079 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
SNPHO15079 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SNPHO15079 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC16.5■□□□□ 0.23
SNPHO15079 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SNPHO15079 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SNPHO15079 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
SNPHO15079 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
SNPHO15079 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC16.5■□□□□ 0.23
SNPHO15079 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
SNPHO15079 AC010082.1-201ENST00000411797 546 ntTSL 2 BASIC16.5■□□□□ 0.23
SNPHO15079 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC16.5■□□□□ 0.23
SNPHO15079 TSPY12P-201ENST00000421279 868 ntBASIC16.5■□□□□ 0.23
SNPHO15079 AC007966.1-201ENST00000421998 1179 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
SNPHO15079 HCG4P8-203ENST00000443049 980 ntBASIC16.5■□□□□ 0.23
SNPHO15079 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SNPHO15079 SEPHS1P7-201ENST00000452995 1177 ntBASIC16.5■□□□□ 0.23
SNPHO15079 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
SNPHO15079 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC16.5■□□□□ 0.23
SNPHO15079 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
SNPHO15079 AL592071.1-201ENST00000611956 408 ntBASIC16.5■□□□□ 0.23
SNPHO15079 AC092119.3-201ENST00000612618 583 ntBASIC16.5■□□□□ 0.23
SNPHO15079 AC073578.4-201ENST00000623945 514 ntBASIC16.5■□□□□ 0.23
SNPHO15079 ANKRD20A8P-203ENST00000641373 517 ntBASIC16.5■□□□□ 0.23
SNPHO15079 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
SNPHO15079 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SNPHO15079 LINC00167-201ENST00000530583 1419 ntBASIC16.5■□□□□ 0.23
SNPHO15079 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
SNPHO15079 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC16.5■□□□□ 0.23
SNPHO15079 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
SNPHO15079 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC16.5■□□□□ 0.23
SNPHO15079 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SNPHO15079 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC16.5■□□□□ 0.23
SNPHO15079 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
SNPHO15079 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC16.5■□□□□ 0.23
SNPHO15079 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SNPHO15079 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SNPHO15079 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
SNPHO15079 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
SNPHO15079 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
SNPHO15079 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC16.49■□□□□ 0.23
SNPHO15079 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
SNPHO15079 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
SNPHO15079 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SNPHO15079 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC16.49■□□□□ 0.23
SNPHO15079 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
SNPHO15079 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SNPHO15079 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
SNPHO15079 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC16.49■□□□□ 0.23
SNPHO15079 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SNPHO15079 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
SNPHO15079 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SNPHO15079 ZRANB2-AS2-201ENST00000411721 518 ntTSL 3 BASIC16.49■□□□□ 0.23
SNPHO15079 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
SNPHO15079 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC16.49■□□□□ 0.23
SNPHO15079 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC16.49■□□□□ 0.23
SNPHO15079 MTATP6P17-201ENST00000431030 672 ntBASIC16.49■□□□□ 0.23
SNPHO15079 DRAXINP1-201ENST00000437611 948 ntBASIC16.49■□□□□ 0.23
SNPHO15079 GYG2-AS1-201ENST00000445107 515 ntTSL 5 BASIC16.49■□□□□ 0.23
SNPHO15079 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC16.49■□□□□ 0.23
SNPHO15079 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
SNPHO15079 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
SNPHO15079 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
SNPHO15079 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC16.49■□□□□ 0.23
SNPHO15079 MIR3180-1-201ENST00000580374 94 ntBASIC16.49■□□□□ 0.23
SNPHO15079 MIR3180-3-201ENST00000584616 94 ntBASIC16.49■□□□□ 0.23
SNPHO15079 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC16.49■□□□□ 0.23
SNPHO15079 AC121493.1-201ENST00000602316 450 ntBASIC16.49■□□□□ 0.23
SNPHO15079 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC16.49■□□□□ 0.23
SNPHO15079 FGA-203ENST00000622532 1130 ntTSL 5 BASIC16.49■□□□□ 0.23
SNPHO15079 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SNPHO15079 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SNPHO15079 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
SNPHO15079 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
SNPHO15079 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
SNPHO15079 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC16.49■□□□□ 0.23
SNPHO15079 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC16.49■□□□□ 0.23
SNPHO15079 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SNPHO15079 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC16.49■□□□□ 0.23
SNPHO15079 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SNPHO15079 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SNPHO15079 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SNPHO15079 LINC00602-201ENST00000629776 2065 ntBASIC16.49■□□□□ 0.23
SNPHO15079 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
SNPHO15079 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
SNPHO15079 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
SNPHO15079 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
SNPHO15079 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
SNPHO15079 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
SNPHO15079 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
SNPHO15079 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
SNPHO15079 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
SNPHO15079 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
SNPHO15079 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
SNPHO15079 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC16.48■□□□□ 0.23
SNPHO15079 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
SNPHO15079 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
SNPHO15079 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms