Protein–RNA interactions for Protein: O00311

CDC7, Cell division cycle 7-related protein kinase, humanhuman

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC7O00311 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC17.03■□□□□ 0.32
CDC7O00311 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC17.03■□□□□ 0.32
CDC7O00311 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CDC7O00311 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CDC7O00311 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC17.03■□□□□ 0.32
CDC7O00311 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
CDC7O00311 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
CDC7O00311 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CDC7O00311 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CDC7O00311 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
CDC7O00311 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CDC7O00311 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC17.02■□□□□ 0.32
CDC7O00311 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC17.02■□□□□ 0.32
CDC7O00311 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
CDC7O00311 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC17.02■□□□□ 0.32
CDC7O00311 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC17.02■□□□□ 0.32
CDC7O00311 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CDC7O00311 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
CDC7O00311 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
CDC7O00311 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CDC7O00311 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
CDC7O00311 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CDC7O00311 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
CDC7O00311 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CDC7O00311 AC003669.1-201ENST00000334569 611 ntBASIC17.02■□□□□ 0.32
CDC7O00311 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CDC7O00311 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CDC7O00311 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC17.02■□□□□ 0.32
CDC7O00311 KLF4P1-201ENST00000412782 1185 ntBASIC17.02■□□□□ 0.32
CDC7O00311 ATP5G2P1-201ENST00000433580 426 ntBASIC17.02■□□□□ 0.32
CDC7O00311 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
CDC7O00311 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC17.02■□□□□ 0.32
CDC7O00311 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC17.02■□□□□ 0.32
CDC7O00311 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC17.02■□□□□ 0.32
CDC7O00311 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC17.02■□□□□ 0.32
CDC7O00311 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC17.02■□□□□ 0.32
CDC7O00311 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC17.02■□□□□ 0.32
CDC7O00311 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC17.02■□□□□ 0.32
CDC7O00311 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC17.02■□□□□ 0.32
CDC7O00311 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CDC7O00311 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC17.02■□□□□ 0.32
CDC7O00311 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CDC7O00311 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC17.02■□□□□ 0.31
CDC7O00311 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CDC7O00311 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.31
CDC7O00311 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
CDC7O00311 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC17.02■□□□□ 0.31
CDC7O00311 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CDC7O00311 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
CDC7O00311 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.31
CDC7O00311 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CDC7O00311 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC17.01■□□□□ 0.31
CDC7O00311 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC17.01■□□□□ 0.31
CDC7O00311 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
CDC7O00311 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
CDC7O00311 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CDC7O00311 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
CDC7O00311 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CDC7O00311 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CDC7O00311 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CDC7O00311 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CDC7O00311 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CDC7O00311 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC17.01■□□□□ 0.31
CDC7O00311 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CDC7O00311 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC17.01■□□□□ 0.31
CDC7O00311 FUOM-202ENST00000368551 628 ntTSL 3 BASIC17.01■□□□□ 0.31
CDC7O00311 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CDC7O00311 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC17.01■□□□□ 0.31
CDC7O00311 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CDC7O00311 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC17.01■□□□□ 0.31
CDC7O00311 AC092329.2-201ENST00000598402 547 ntBASIC17.01■□□□□ 0.31
CDC7O00311 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC17.01■□□□□ 0.31
CDC7O00311 AC114341.1-201ENST00000618070 349 ntBASIC17.01■□□□□ 0.31
CDC7O00311 AC093458.2-201ENST00000623150 629 ntBASIC17.01■□□□□ 0.31
CDC7O00311 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC17.01■□□□□ 0.31
CDC7O00311 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
CDC7O00311 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CDC7O00311 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC17.01■□□□□ 0.31
CDC7O00311 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
CDC7O00311 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CDC7O00311 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CDC7O00311 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
CDC7O00311 AC005915.1-201ENST00000624912 2018 ntBASIC17.01■□□□□ 0.31
CDC7O00311 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CDC7O00311 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC17■□□□□ 0.31
CDC7O00311 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
CDC7O00311 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC17■□□□□ 0.31
CDC7O00311 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC17■□□□□ 0.31
CDC7O00311 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CDC7O00311 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC17■□□□□ 0.31
CDC7O00311 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC17■□□□□ 0.31
CDC7O00311 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC17■□□□□ 0.31
CDC7O00311 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CDC7O00311 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CDC7O00311 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC17■□□□□ 0.31
CDC7O00311 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC17■□□□□ 0.31
CDC7O00311 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CDC7O00311 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC17■□□□□ 0.31
CDC7O00311 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC17■□□□□ 0.31
CDC7O00311 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC17■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms