Protein–RNA interactions for Protein: H3BT56

CHKB-CPT1B, CHKB-CPT1B readthrough (NMD candidate) (Fragment), humanhuman

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1BH3BT56 CACNA1C-207ENST00000399597 6511 ntAPPRIS ALT2 TSL 1 (best) BASIC9.62□□□□□ -0.87
CHKB-CPT1BH3BT56 CACNA1C-208ENST00000399601 6511 ntAPPRIS ALT2 TSL 1 (best) BASIC9.62□□□□□ -0.87
CHKB-CPT1BH3BT56 CACNA1C-217ENST00000399641 6511 ntAPPRIS ALT2 TSL 1 (best) BASIC9.62□□□□□ -0.87
CHKB-CPT1BH3BT56 CACNA1C-218ENST00000399644 6511 ntAPPRIS ALT2 TSL 1 (best) BASIC9.62□□□□□ -0.87
CHKB-CPT1BH3BT56 SMCR8-201ENST00000406438 8279 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
CHKB-CPT1BH3BT56 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
CHKB-CPT1BH3BT56 EHMT2-201ENST00000375528 4047 ntAPPRIS ALT2 TSL 2 BASIC9.62□□□□□ -0.87
CHKB-CPT1BH3BT56 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
CHKB-CPT1BH3BT56 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC9.62□□□□□ -0.87
CHKB-CPT1BH3BT56 NUTM2E-201ENST00000429984 3292 ntAPPRIS P5 TSL 5 BASIC9.62□□□□□ -0.87
CHKB-CPT1BH3BT56 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC9.62□□□□□ -0.87
CHKB-CPT1BH3BT56 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
CHKB-CPT1BH3BT56 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
CHKB-CPT1BH3BT56 ACKR3-201ENST00000272928 2203 ntAPPRIS P1 TSL 2 BASIC9.62□□□□□ -0.87
CHKB-CPT1BH3BT56 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
CHKB-CPT1BH3BT56 CHST5-201ENST00000336257 3245 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
CHKB-CPT1BH3BT56 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
CHKB-CPT1BH3BT56 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC9.61□□□□□ -0.87
CHKB-CPT1BH3BT56 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC9.61□□□□□ -0.87
CHKB-CPT1BH3BT56 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC9.61□□□□□ -0.87
CHKB-CPT1BH3BT56 AC007920.1-201ENST00000356133 2674 ntTSL 2 BASIC9.61□□□□□ -0.87
CHKB-CPT1BH3BT56 IST1-203ENST00000378799 4843 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
CHKB-CPT1BH3BT56 PCDHGA8-202ENST00000610569 6480 ntAPPRIS P1 BASIC9.61□□□□□ -0.87
CHKB-CPT1BH3BT56 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC9.61□□□□□ -0.87
CHKB-CPT1BH3BT56 USO1-201ENST00000264904 4135 ntTSL 2 BASIC9.61□□□□□ -0.87
CHKB-CPT1BH3BT56 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
CHKB-CPT1BH3BT56 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
CHKB-CPT1BH3BT56 MBD6-201ENST00000355673 4282 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
CHKB-CPT1BH3BT56 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
CHKB-CPT1BH3BT56 SIAE-201ENST00000263593 5583 ntAPPRIS P3 TSL 1 (best) BASIC9.61□□□□□ -0.87
CHKB-CPT1BH3BT56 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC9.61□□□□□ -0.87
CHKB-CPT1BH3BT56 RBM12-202ENST00000374104 5213 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
CHKB-CPT1BH3BT56 ADAM15-203ENST00000356955 2949 ntAPPRIS P4 TSL 1 (best) BASIC9.61□□□□□ -0.87
CHKB-CPT1BH3BT56 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC9.61□□□□□ -0.87
CHKB-CPT1BH3BT56 FRMD8-201ENST00000317568 3723 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
CHKB-CPT1BH3BT56 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC9.61□□□□□ -0.87
CHKB-CPT1BH3BT56 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
CHKB-CPT1BH3BT56 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC9.61□□□□□ -0.87
CHKB-CPT1BH3BT56 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
CHKB-CPT1BH3BT56 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
CHKB-CPT1BH3BT56 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
CHKB-CPT1BH3BT56 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
CHKB-CPT1BH3BT56 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
CHKB-CPT1BH3BT56 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
CHKB-CPT1BH3BT56 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC9.61□□□□□ -0.87
CHKB-CPT1BH3BT56 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC9.61□□□□□ -0.87
CHKB-CPT1BH3BT56 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
CHKB-CPT1BH3BT56 AC126177.1-201ENST00000547829 2218 ntBASIC9.61□□□□□ -0.87
CHKB-CPT1BH3BT56 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC9.61□□□□□ -0.87
CHKB-CPT1BH3BT56 ARHGAP45-201ENST00000313093 4273 ntAPPRIS P3 TSL 1 (best) BASIC9.61□□□□□ -0.87
CHKB-CPT1BH3BT56 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC9.61□□□□□ -0.87
CHKB-CPT1BH3BT56 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC9.61□□□□□ -0.87
CHKB-CPT1BH3BT56 PAX5-201ENST00000358127 8615 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
CHKB-CPT1BH3BT56 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC9.61□□□□□ -0.87
CHKB-CPT1BH3BT56 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
CHKB-CPT1BH3BT56 PTPRK-207ENST00000368226 6087 ntAPPRIS P3 TSL 1 (best) BASIC9.61□□□□□ -0.87
CHKB-CPT1BH3BT56 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC9.61□□□□□ -0.87
CHKB-CPT1BH3BT56 MYO1C-218ENST00000575158 4804 ntAPPRIS P3 TSL 5 BASIC9.61□□□□□ -0.87
CHKB-CPT1BH3BT56 NAPEPLD-201ENST00000341533 4972 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
CHKB-CPT1BH3BT56 CPXM2-201ENST00000241305 3554 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
CHKB-CPT1BH3BT56 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC9.61□□□□□ -0.87
CHKB-CPT1BH3BT56 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC9.61□□□□□ -0.87
CHKB-CPT1BH3BT56 SEC14L1-204ENST00000436233 5295 ntAPPRIS P3 TSL 1 (best) BASIC9.61□□□□□ -0.87
CHKB-CPT1BH3BT56 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
CHKB-CPT1BH3BT56 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC9.61□□□□□ -0.87
CHKB-CPT1BH3BT56 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC9.61□□□□□ -0.87
CHKB-CPT1BH3BT56 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC9.61□□□□□ -0.87
CHKB-CPT1BH3BT56 NPAP1-201ENST00000329468 7526 ntAPPRIS P1 BASIC9.61□□□□□ -0.87
CHKB-CPT1BH3BT56 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC9.61□□□□□ -0.87
CHKB-CPT1BH3BT56 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC9.61□□□□□ -0.87
CHKB-CPT1BH3BT56 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC9.61□□□□□ -0.87
CHKB-CPT1BH3BT56 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
CHKB-CPT1BH3BT56 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC9.61□□□□□ -0.87
CHKB-CPT1BH3BT56 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
CHKB-CPT1BH3BT56 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
CHKB-CPT1BH3BT56 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC9.61□□□□□ -0.87
CHKB-CPT1BH3BT56 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC9.61□□□□□ -0.87
CHKB-CPT1BH3BT56 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC9.61□□□□□ -0.87
CHKB-CPT1BH3BT56 CNTNAP5-202ENST00000431078 5284 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
CHKB-CPT1BH3BT56 REV3L-201ENST00000358835 10815 ntAPPRIS P1 TSL 5 BASIC9.61□□□□□ -0.87
CHKB-CPT1BH3BT56 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
CHKB-CPT1BH3BT56 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC9.6□□□□□ -0.87
CHKB-CPT1BH3BT56 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
CHKB-CPT1BH3BT56 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
CHKB-CPT1BH3BT56 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC9.6□□□□□ -0.87
CHKB-CPT1BH3BT56 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
CHKB-CPT1BH3BT56 SERINC5-202ENST00000507668 6479 ntAPPRIS P1 TSL 2 BASIC9.6□□□□□ -0.87
CHKB-CPT1BH3BT56 PBX3-201ENST00000342287 2755 ntAPPRIS ALT1 TSL 5 BASIC9.6□□□□□ -0.87
CHKB-CPT1BH3BT56 AMIGO2-201ENST00000266581 3763 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
CHKB-CPT1BH3BT56 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC9.6□□□□□ -0.87
CHKB-CPT1BH3BT56 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC9.6□□□□□ -0.87
CHKB-CPT1BH3BT56 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC9.6□□□□□ -0.87
CHKB-CPT1BH3BT56 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
CHKB-CPT1BH3BT56 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC9.6□□□□□ -0.87
CHKB-CPT1BH3BT56 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
CHKB-CPT1BH3BT56 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC9.6□□□□□ -0.87
CHKB-CPT1BH3BT56 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC9.6□□□□□ -0.87
CHKB-CPT1BH3BT56 USP51-201ENST00000500968 4407 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
CHKB-CPT1BH3BT56 RBL1-202ENST00000373664 5684 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
CHKB-CPT1BH3BT56 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Retrieved 100 of 98,524 protein–RNA pairs in 65.4 ms