Protein–RNA interactions for Protein: A6NGZ8

SMIM9, Small integral membrane protein 9, humanhuman

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM9A6NGZ8 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.39
SMIM9A6NGZ8 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.39
SMIM9A6NGZ8 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.39
SMIM9A6NGZ8 PCDHB18P-201ENST00000524813 2368 ntBASIC12.58□□□□□ -0.4
SMIM9A6NGZ8 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC12.58□□□□□ -0.4
SMIM9A6NGZ8 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC12.58□□□□□ -0.4
SMIM9A6NGZ8 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC12.58□□□□□ -0.4
SMIM9A6NGZ8 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC12.58□□□□□ -0.4
SMIM9A6NGZ8 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
SMIM9A6NGZ8 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
SMIM9A6NGZ8 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
SMIM9A6NGZ8 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC12.58□□□□□ -0.4
SMIM9A6NGZ8 RAB17-203ENST00000409576 466 ntTSL 3 BASIC12.58□□□□□ -0.4
SMIM9A6NGZ8 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
SMIM9A6NGZ8 FAM197Y8-203ENST00000450145 560 ntBASIC12.58□□□□□ -0.4
SMIM9A6NGZ8 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC12.58□□□□□ -0.4
SMIM9A6NGZ8 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
SMIM9A6NGZ8 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC12.58□□□□□ -0.4
SMIM9A6NGZ8 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC12.58□□□□□ -0.4
SMIM9A6NGZ8 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC12.58□□□□□ -0.4
SMIM9A6NGZ8 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC12.58□□□□□ -0.4
SMIM9A6NGZ8 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC12.58□□□□□ -0.4
SMIM9A6NGZ8 CALM3-211ENST00000598871 561 ntTSL 4 BASIC12.58□□□□□ -0.4
SMIM9A6NGZ8 COPE-211ENST00000600932 1144 ntTSL 5 BASIC12.58□□□□□ -0.4
SMIM9A6NGZ8 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
SMIM9A6NGZ8 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC12.58□□□□□ -0.4
SMIM9A6NGZ8 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
SMIM9A6NGZ8 AL596257.1-201ENST00000641463 2694 ntBASIC12.58□□□□□ -0.4
SMIM9A6NGZ8 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
SMIM9A6NGZ8 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC12.58□□□□□ -0.4
SMIM9A6NGZ8 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
SMIM9A6NGZ8 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
SMIM9A6NGZ8 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
SMIM9A6NGZ8 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
SMIM9A6NGZ8 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
SMIM9A6NGZ8 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC12.58□□□□□ -0.4
SMIM9A6NGZ8 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
SMIM9A6NGZ8 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
SMIM9A6NGZ8 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
SMIM9A6NGZ8 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
SMIM9A6NGZ8 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC12.57□□□□□ -0.4
SMIM9A6NGZ8 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC12.57□□□□□ -0.4
SMIM9A6NGZ8 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC12.57□□□□□ -0.4
SMIM9A6NGZ8 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
SMIM9A6NGZ8 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
SMIM9A6NGZ8 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
SMIM9A6NGZ8 NCF1C-201ENST00000438382 1427 ntBASIC12.57□□□□□ -0.4
SMIM9A6NGZ8 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC12.57□□□□□ -0.4
SMIM9A6NGZ8 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
SMIM9A6NGZ8 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
SMIM9A6NGZ8 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC12.57□□□□□ -0.4
SMIM9A6NGZ8 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
SMIM9A6NGZ8 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
SMIM9A6NGZ8 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC12.57□□□□□ -0.4
SMIM9A6NGZ8 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
SMIM9A6NGZ8 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
SMIM9A6NGZ8 ACTG1P4-201ENST00000425123 1122 ntBASIC12.57□□□□□ -0.4
SMIM9A6NGZ8 KRT18P67-201ENST00000432816 1264 ntBASIC12.57□□□□□ -0.4
SMIM9A6NGZ8 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC12.57□□□□□ -0.4
SMIM9A6NGZ8 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
SMIM9A6NGZ8 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
SMIM9A6NGZ8 AC093909.1-201ENST00000504731 1122 ntBASIC12.57□□□□□ -0.4
SMIM9A6NGZ8 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
SMIM9A6NGZ8 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC12.57□□□□□ -0.4
SMIM9A6NGZ8 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC12.57□□□□□ -0.4
SMIM9A6NGZ8 AC139887.3-201ENST00000568585 713 ntBASIC12.57□□□□□ -0.4
SMIM9A6NGZ8 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
SMIM9A6NGZ8 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC12.57□□□□□ -0.4
SMIM9A6NGZ8 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC12.57□□□□□ -0.4
SMIM9A6NGZ8 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC12.57□□□□□ -0.4
SMIM9A6NGZ8 MTDHP4-201ENST00000600287 670 ntBASIC12.57□□□□□ -0.4
SMIM9A6NGZ8 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
SMIM9A6NGZ8 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
SMIM9A6NGZ8 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC12.57□□□□□ -0.4
SMIM9A6NGZ8 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC12.57□□□□□ -0.4
SMIM9A6NGZ8 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC12.57□□□□□ -0.4
SMIM9A6NGZ8 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC12.57□□□□□ -0.4
SMIM9A6NGZ8 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
SMIM9A6NGZ8 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC12.57□□□□□ -0.4
SMIM9A6NGZ8 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
SMIM9A6NGZ8 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
SMIM9A6NGZ8 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC12.57□□□□□ -0.4
SMIM9A6NGZ8 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
SMIM9A6NGZ8 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC12.57□□□□□ -0.4
SMIM9A6NGZ8 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC12.57□□□□□ -0.4
SMIM9A6NGZ8 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
SMIM9A6NGZ8 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
SMIM9A6NGZ8 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
SMIM9A6NGZ8 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
SMIM9A6NGZ8 GID4-202ENST00000376345 1391 ntTSL 3 BASIC12.56□□□□□ -0.4
SMIM9A6NGZ8 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
SMIM9A6NGZ8 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
SMIM9A6NGZ8 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC12.56□□□□□ -0.4
SMIM9A6NGZ8 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
SMIM9A6NGZ8 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
SMIM9A6NGZ8 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
SMIM9A6NGZ8 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
SMIM9A6NGZ8 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
SMIM9A6NGZ8 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
SMIM9A6NGZ8 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 45.7 ms