Protein–RNA interactions for Protein: A6NED2

RCCD1, RCC1 domain-containing protein 1, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1A6NED2 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
RCCD1A6NED2 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
RCCD1A6NED2 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
RCCD1A6NED2 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
RCCD1A6NED2 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC18.43■□□□□ 0.54
RCCD1A6NED2 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC18.43■□□□□ 0.54
RCCD1A6NED2 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC18.43■□□□□ 0.54
RCCD1A6NED2 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
RCCD1A6NED2 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
RCCD1A6NED2 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
RCCD1A6NED2 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
RCCD1A6NED2 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC18.42■□□□□ 0.54
RCCD1A6NED2 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
RCCD1A6NED2 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
RCCD1A6NED2 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
RCCD1A6NED2 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
RCCD1A6NED2 FRMD6-AS1-201ENST00000617151 2229 ntBASIC18.42■□□□□ 0.54
RCCD1A6NED2 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
RCCD1A6NED2 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC18.42■□□□□ 0.54
RCCD1A6NED2 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
RCCD1A6NED2 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC18.42■□□□□ 0.54
RCCD1A6NED2 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC18.42■□□□□ 0.54
RCCD1A6NED2 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC18.42■□□□□ 0.54
RCCD1A6NED2 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC18.42■□□□□ 0.54
RCCD1A6NED2 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
RCCD1A6NED2 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
RCCD1A6NED2 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
RCCD1A6NED2 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC18.42■□□□□ 0.54
RCCD1A6NED2 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
RCCD1A6NED2 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC18.42■□□□□ 0.54
RCCD1A6NED2 AL138831.2-201ENST00000606564 490 ntBASIC18.42■□□□□ 0.54
RCCD1A6NED2 AL353801.3-201ENST00000609898 542 ntBASIC18.42■□□□□ 0.54
RCCD1A6NED2 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
RCCD1A6NED2 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
RCCD1A6NED2 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
RCCD1A6NED2 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC18.42■□□□□ 0.54
RCCD1A6NED2 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC18.42■□□□□ 0.54
RCCD1A6NED2 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC18.42■□□□□ 0.54
RCCD1A6NED2 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC18.42■□□□□ 0.54
RCCD1A6NED2 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
RCCD1A6NED2 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
RCCD1A6NED2 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
RCCD1A6NED2 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
RCCD1A6NED2 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
RCCD1A6NED2 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
RCCD1A6NED2 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
RCCD1A6NED2 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
RCCD1A6NED2 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
RCCD1A6NED2 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC18.41■□□□□ 0.54
RCCD1A6NED2 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
RCCD1A6NED2 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
RCCD1A6NED2 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC18.41■□□□□ 0.54
RCCD1A6NED2 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC18.41■□□□□ 0.54
RCCD1A6NED2 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC18.41■□□□□ 0.54
RCCD1A6NED2 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC18.41■□□□□ 0.54
RCCD1A6NED2 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
RCCD1A6NED2 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
RCCD1A6NED2 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC18.41■□□□□ 0.54
RCCD1A6NED2 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
RCCD1A6NED2 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC18.41■□□□□ 0.54
RCCD1A6NED2 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
RCCD1A6NED2 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
RCCD1A6NED2 AL137013.1-201ENST00000432946 1228 ntBASIC18.41■□□□□ 0.54
RCCD1A6NED2 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC18.41■□□□□ 0.54
RCCD1A6NED2 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC18.41■□□□□ 0.54
RCCD1A6NED2 AC122714.2-201ENST00000502787 707 ntBASIC18.41■□□□□ 0.54
RCCD1A6NED2 AC083849.1-201ENST00000615227 514 ntBASIC18.41■□□□□ 0.54
RCCD1A6NED2 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
RCCD1A6NED2 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
RCCD1A6NED2 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC18.41■□□□□ 0.54
RCCD1A6NED2 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC18.41■□□□□ 0.54
RCCD1A6NED2 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
RCCD1A6NED2 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
RCCD1A6NED2 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC18.41■□□□□ 0.54
RCCD1A6NED2 LTF-203ENST00000426532 2494 ntTSL 2 BASIC18.41■□□□□ 0.54
RCCD1A6NED2 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC18.41■□□□□ 0.54
RCCD1A6NED2 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
RCCD1A6NED2 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC18.41■□□□□ 0.54
RCCD1A6NED2 ABR-203ENST00000536794 2213 ntTSL 2 BASIC18.41■□□□□ 0.54
RCCD1A6NED2 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
RCCD1A6NED2 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC18.41■□□□□ 0.54
RCCD1A6NED2 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
RCCD1A6NED2 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
RCCD1A6NED2 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC18.4■□□□□ 0.54
RCCD1A6NED2 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC18.4■□□□□ 0.54
RCCD1A6NED2 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
RCCD1A6NED2 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
RCCD1A6NED2 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC18.4■□□□□ 0.54
RCCD1A6NED2 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC18.4■□□□□ 0.54
RCCD1A6NED2 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC18.4■□□□□ 0.54
RCCD1A6NED2 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
RCCD1A6NED2 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
RCCD1A6NED2 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
RCCD1A6NED2 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC18.4■□□□□ 0.54
RCCD1A6NED2 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
RCCD1A6NED2 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
RCCD1A6NED2 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC18.4■□□□□ 0.54
RCCD1A6NED2 AC097493.4-201ENST00000641197 219 ntBASIC18.4■□□□□ 0.54
RCCD1A6NED2 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
RCCD1A6NED2 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms