Protein–RNA interactions for Protein: A3KN83

SBNO1, Protein strawberry notch homolog 1, humanhuman

Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SBNO1A3KN83 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC23.27■■□□□ 1.31
SBNO1A3KN83 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC23.27■■□□□ 1.31
SBNO1A3KN83 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
SBNO1A3KN83 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC23.26■■□□□ 1.31
SBNO1A3KN83 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
SBNO1A3KN83 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
SBNO1A3KN83 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC23.26■■□□□ 1.31
SBNO1A3KN83 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC23.26■■□□□ 1.31
SBNO1A3KN83 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC23.26■■□□□ 1.31
SBNO1A3KN83 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC23.26■■□□□ 1.31
SBNO1A3KN83 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC23.26■■□□□ 1.31
SBNO1A3KN83 AC104581.1-202ENST00000635932 2618 ntBASIC23.26■■□□□ 1.31
SBNO1A3KN83 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
SBNO1A3KN83 UXT-AS1-201ENST00000590504 1525 ntBASIC23.26■■□□□ 1.31
SBNO1A3KN83 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
SBNO1A3KN83 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
SBNO1A3KN83 MRPS18AP1-201ENST00000414458 589 ntBASIC23.26■■□□□ 1.31
SBNO1A3KN83 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC23.26■■□□□ 1.31
SBNO1A3KN83 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
SBNO1A3KN83 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC23.26■■□□□ 1.31
SBNO1A3KN83 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC23.26■■□□□ 1.31
SBNO1A3KN83 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC23.26■■□□□ 1.31
SBNO1A3KN83 MIR6080-201ENST00000617359 66 ntBASIC23.26■■□□□ 1.31
SBNO1A3KN83 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC23.26■■□□□ 1.31
SBNO1A3KN83 AL358472.5-202ENST00000641448 1267 ntBASIC23.26■■□□□ 1.31
SBNO1A3KN83 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
SBNO1A3KN83 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
SBNO1A3KN83 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC23.25■■□□□ 1.31
SBNO1A3KN83 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC23.25■■□□□ 1.31
SBNO1A3KN83 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC23.25■■□□□ 1.31
SBNO1A3KN83 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
SBNO1A3KN83 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC23.25■■□□□ 1.31
SBNO1A3KN83 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
SBNO1A3KN83 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
SBNO1A3KN83 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
SBNO1A3KN83 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
SBNO1A3KN83 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC23.25■■□□□ 1.31
SBNO1A3KN83 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
SBNO1A3KN83 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC23.25■■□□□ 1.31
SBNO1A3KN83 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC23.25■■□□□ 1.31
SBNO1A3KN83 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC23.25■■□□□ 1.31
SBNO1A3KN83 AL139327.4-201ENST00000612362 153 ntBASIC23.25■■□□□ 1.31
SBNO1A3KN83 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
SBNO1A3KN83 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC23.25■■□□□ 1.31
SBNO1A3KN83 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC23.24■■□□□ 1.31
SBNO1A3KN83 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC23.24■■□□□ 1.31
SBNO1A3KN83 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC23.24■■□□□ 1.31
SBNO1A3KN83 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
SBNO1A3KN83 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC23.24■■□□□ 1.31
SBNO1A3KN83 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
SBNO1A3KN83 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
SBNO1A3KN83 CD81-202ENST00000381036 880 ntTSL 3 BASIC23.24■■□□□ 1.31
SBNO1A3KN83 SERBP1P5-201ENST00000510079 1181 ntBASIC23.24■■□□□ 1.31
SBNO1A3KN83 ALG1L8P-201ENST00000533887 760 ntBASIC23.24■■□□□ 1.31
SBNO1A3KN83 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC23.24■■□□□ 1.31
SBNO1A3KN83 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC23.24■■□□□ 1.31
SBNO1A3KN83 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
SBNO1A3KN83 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
SBNO1A3KN83 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC23.24■■□□□ 1.31
SBNO1A3KN83 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC23.23■■□□□ 1.31
SBNO1A3KN83 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
SBNO1A3KN83 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
SBNO1A3KN83 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
SBNO1A3KN83 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
SBNO1A3KN83 BICD1-207ENST00000551848 1962 ntBASIC23.23■■□□□ 1.31
SBNO1A3KN83 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
SBNO1A3KN83 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC23.23■■□□□ 1.31
SBNO1A3KN83 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
SBNO1A3KN83 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC23.23■■□□□ 1.31
SBNO1A3KN83 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC23.23■■□□□ 1.31
SBNO1A3KN83 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC23.23■■□□□ 1.31
SBNO1A3KN83 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC23.23■■□□□ 1.31
SBNO1A3KN83 HNRNPRP1-201ENST00000453465 1695 ntBASIC23.23■■□□□ 1.31
SBNO1A3KN83 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC23.23■■□□□ 1.31
SBNO1A3KN83 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC23.23■■□□□ 1.31
SBNO1A3KN83 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
SBNO1A3KN83 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC23.23■■□□□ 1.31
SBNO1A3KN83 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
SBNO1A3KN83 OR8S1-201ENST00000310194 1080 ntBASIC23.23■■□□□ 1.31
SBNO1A3KN83 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC23.23■■□□□ 1.31
SBNO1A3KN83 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC23.23■■□□□ 1.31
SBNO1A3KN83 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
SBNO1A3KN83 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC23.23■■□□□ 1.31
SBNO1A3KN83 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC23.23■■□□□ 1.31
SBNO1A3KN83 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
SBNO1A3KN83 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC23.23■■□□□ 1.31
SBNO1A3KN83 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC23.23■■□□□ 1.31
SBNO1A3KN83 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC23.23■■□□□ 1.31
SBNO1A3KN83 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC23.23■■□□□ 1.31
SBNO1A3KN83 AC025048.6-201ENST00000634326 1161 ntBASIC23.23■■□□□ 1.31
SBNO1A3KN83 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC23.23■■□□□ 1.31
SBNO1A3KN83 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC23.23■■□□□ 1.31
SBNO1A3KN83 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC23.23■■□□□ 1.31
SBNO1A3KN83 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC23.23■■□□□ 1.31
SBNO1A3KN83 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
SBNO1A3KN83 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC23.22■■□□□ 1.31
SBNO1A3KN83 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
SBNO1A3KN83 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC23.22■■□□□ 1.31
SBNO1A3KN83 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC23.22■■□□□ 1.31
SBNO1A3KN83 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Retrieved 100 of 98,524 protein–RNA pairs in 50.1 ms