Protein–RNA interactions for Protein: A2PYH4

HFM1, Probable ATP-dependent DNA helicase HFM1, humanhuman

Predictions only

Length 1,435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HFM1A2PYH4 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC25.4■■□□□ 1.66
HFM1A2PYH4 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC25.4■■□□□ 1.66
HFM1A2PYH4 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC25.4■■□□□ 1.66
HFM1A2PYH4 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC25.4■■□□□ 1.66
HFM1A2PYH4 AC005412.3-201ENST00000580309 715 ntBASIC25.4■■□□□ 1.66
HFM1A2PYH4 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC25.4■■□□□ 1.66
HFM1A2PYH4 AC068137.2-201ENST00000605408 478 ntBASIC25.4■■□□□ 1.66
HFM1A2PYH4 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC25.4■■□□□ 1.66
HFM1A2PYH4 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
HFM1A2PYH4 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC25.4■■□□□ 1.66
HFM1A2PYH4 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
HFM1A2PYH4 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC25.4■■□□□ 1.66
HFM1A2PYH4 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
HFM1A2PYH4 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
HFM1A2PYH4 TOP3BP1-201ENST00000420768 1380 ntBASIC25.4■■□□□ 1.66
HFM1A2PYH4 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC25.39■■□□□ 1.66
HFM1A2PYH4 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC25.39■■□□□ 1.66
HFM1A2PYH4 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
HFM1A2PYH4 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC25.39■■□□□ 1.66
HFM1A2PYH4 COA5-202ENST00000409997 557 ntTSL 4 BASIC25.39■■□□□ 1.66
HFM1A2PYH4 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC25.39■■□□□ 1.66
HFM1A2PYH4 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC25.39■■□□□ 1.66
HFM1A2PYH4 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC25.39■■□□□ 1.66
HFM1A2PYH4 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC25.39■■□□□ 1.66
HFM1A2PYH4 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC25.39■■□□□ 1.66
HFM1A2PYH4 MED16-214ENST00000617672 554 ntTSL 5 BASIC25.39■■□□□ 1.66
HFM1A2PYH4 AL691403.2-201ENST00000618460 490 ntBASIC25.39■■□□□ 1.66
HFM1A2PYH4 AC055717.3-201ENST00000622967 595 ntBASIC25.39■■□□□ 1.66
HFM1A2PYH4 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
HFM1A2PYH4 AC092919.2-201ENST00000623631 1645 ntBASIC25.39■■□□□ 1.66
HFM1A2PYH4 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC25.39■■□□□ 1.66
HFM1A2PYH4 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
HFM1A2PYH4 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC25.39■■□□□ 1.66
HFM1A2PYH4 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC25.39■■□□□ 1.66
HFM1A2PYH4 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC25.39■■□□□ 1.65
HFM1A2PYH4 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC25.39■■□□□ 1.65
HFM1A2PYH4 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC25.39■■□□□ 1.65
HFM1A2PYH4 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC25.39■■□□□ 1.65
HFM1A2PYH4 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC25.39■■□□□ 1.65
HFM1A2PYH4 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC25.39■■□□□ 1.65
HFM1A2PYH4 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC25.39■■□□□ 1.65
HFM1A2PYH4 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.65
HFM1A2PYH4 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.65
HFM1A2PYH4 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
HFM1A2PYH4 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC25.38■■□□□ 1.65
HFM1A2PYH4 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC25.38■■□□□ 1.65
HFM1A2PYH4 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC25.38■■□□□ 1.65
HFM1A2PYH4 AC091167.2-201ENST00000579581 588 ntBASIC25.38■■□□□ 1.65
HFM1A2PYH4 MTDHP5-201ENST00000598980 586 ntBASIC25.38■■□□□ 1.65
HFM1A2PYH4 FOS-208ENST00000555686 1496 ntTSL 2 BASIC25.38■■□□□ 1.65
HFM1A2PYH4 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC25.38■■□□□ 1.65
HFM1A2PYH4 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC25.38■■□□□ 1.65
HFM1A2PYH4 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC25.38■■□□□ 1.65
HFM1A2PYH4 AC092053.1-201ENST00000605787 1936 ntBASIC25.38■■□□□ 1.65
HFM1A2PYH4 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
HFM1A2PYH4 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC25.38■■□□□ 1.65
HFM1A2PYH4 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
HFM1A2PYH4 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
HFM1A2PYH4 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC25.38■■□□□ 1.65
HFM1A2PYH4 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
HFM1A2PYH4 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC25.38■■□□□ 1.65
HFM1A2PYH4 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC25.38■■□□□ 1.65
HFM1A2PYH4 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
HFM1A2PYH4 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
HFM1A2PYH4 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
HFM1A2PYH4 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC25.37■■□□□ 1.65
HFM1A2PYH4 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC25.37■■□□□ 1.65
HFM1A2PYH4 THTPA-204ENST00000554970 569 ntTSL 4 BASIC25.37■■□□□ 1.65
HFM1A2PYH4 THTPA-206ENST00000556015 535 ntTSL 3 BASIC25.37■■□□□ 1.65
HFM1A2PYH4 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
HFM1A2PYH4 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC25.37■■□□□ 1.65
HFM1A2PYH4 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
HFM1A2PYH4 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
HFM1A2PYH4 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
HFM1A2PYH4 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC25.37■■□□□ 1.65
HFM1A2PYH4 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC25.37■■□□□ 1.65
HFM1A2PYH4 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC25.37■■□□□ 1.65
HFM1A2PYH4 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
HFM1A2PYH4 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC25.37■■□□□ 1.65
HFM1A2PYH4 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC25.37■■□□□ 1.65
HFM1A2PYH4 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC25.37■■□□□ 1.65
HFM1A2PYH4 AL513480.1-201ENST00000451731 511 ntBASIC25.37■■□□□ 1.65
HFM1A2PYH4 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC25.37■■□□□ 1.65
HFM1A2PYH4 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC25.37■■□□□ 1.65
HFM1A2PYH4 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC25.37■■□□□ 1.65
HFM1A2PYH4 AL078644.1-201ENST00000609881 752 ntBASIC25.37■■□□□ 1.65
HFM1A2PYH4 C20orf181-201ENST00000623918 480 ntBASIC25.37■■□□□ 1.65
HFM1A2PYH4 BANP-227ENST00000626016 2144 ntTSL 2 BASIC25.37■■□□□ 1.65
HFM1A2PYH4 AC007064.4-201ENST00000637740 555 ntBASIC25.37■■□□□ 1.65
HFM1A2PYH4 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
HFM1A2PYH4 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC25.36■■□□□ 1.65
HFM1A2PYH4 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
HFM1A2PYH4 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC25.36■■□□□ 1.65
HFM1A2PYH4 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC25.36■■□□□ 1.65
HFM1A2PYH4 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC25.36■■□□□ 1.65
HFM1A2PYH4 AL023806.1-201ENST00000603994 1649 ntBASIC25.36■■□□□ 1.65
HFM1A2PYH4 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
HFM1A2PYH4 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC25.36■■□□□ 1.65
HFM1A2PYH4 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC25.36■■□□□ 1.65
HFM1A2PYH4 MKNK2P1-201ENST00000437526 628 ntBASIC25.36■■□□□ 1.65
Retrieved 100 of 98,524 protein–RNA pairs in 43.6 ms