Protein–RNA interactions for Protein: A0A5B6

TCRBV3S1, T-cell receptor beta variable 28 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV3S1A0A5B6 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC16.23■□□□□ 0.19
TCRBV3S1A0A5B6 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
TCRBV3S1A0A5B6 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
TCRBV3S1A0A5B6 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC16.23■□□□□ 0.19
TCRBV3S1A0A5B6 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
TCRBV3S1A0A5B6 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
TCRBV3S1A0A5B6 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
TCRBV3S1A0A5B6 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC16.23■□□□□ 0.19
TCRBV3S1A0A5B6 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
TCRBV3S1A0A5B6 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC16.23■□□□□ 0.19
TCRBV3S1A0A5B6 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC16.23■□□□□ 0.19
TCRBV3S1A0A5B6 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC16.23■□□□□ 0.19
TCRBV3S1A0A5B6 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TCRBV3S1A0A5B6 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TCRBV3S1A0A5B6 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
TCRBV3S1A0A5B6 TSPY12P-201ENST00000421279 868 ntBASIC16.23■□□□□ 0.19
TCRBV3S1A0A5B6 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
TCRBV3S1A0A5B6 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC16.23■□□□□ 0.19
TCRBV3S1A0A5B6 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TCRBV3S1A0A5B6 CNP-204ENST00000472031 1019 ntTSL 2 BASIC16.23■□□□□ 0.19
TCRBV3S1A0A5B6 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
TCRBV3S1A0A5B6 AC104640.1-201ENST00000562617 2109 ntBASIC16.23■□□□□ 0.19
TCRBV3S1A0A5B6 NEK4P2-201ENST00000580004 1012 ntBASIC16.23■□□□□ 0.19
TCRBV3S1A0A5B6 TEN1-204ENST00000588202 862 ntTSL 3 BASIC16.23■□□□□ 0.19
TCRBV3S1A0A5B6 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
TCRBV3S1A0A5B6 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC16.23■□□□□ 0.19
TCRBV3S1A0A5B6 AC004263.2-201ENST00000617183 678 ntBASIC16.23■□□□□ 0.19
TCRBV3S1A0A5B6 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TCRBV3S1A0A5B6 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TCRBV3S1A0A5B6 FRMD8P1-201ENST00000440433 1524 ntBASIC16.23■□□□□ 0.19
TCRBV3S1A0A5B6 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TCRBV3S1A0A5B6 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
TCRBV3S1A0A5B6 ALOX12P2-203ENST00000570921 1945 ntBASIC16.23■□□□□ 0.19
TCRBV3S1A0A5B6 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
TCRBV3S1A0A5B6 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
TCRBV3S1A0A5B6 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
TCRBV3S1A0A5B6 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
TCRBV3S1A0A5B6 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TCRBV3S1A0A5B6 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
TCRBV3S1A0A5B6 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC16.22■□□□□ 0.19
TCRBV3S1A0A5B6 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TCRBV3S1A0A5B6 AL391256.1-201ENST00000443260 1855 ntBASIC16.22■□□□□ 0.19
TCRBV3S1A0A5B6 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
TCRBV3S1A0A5B6 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC16.22■□□□□ 0.19
TCRBV3S1A0A5B6 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
TCRBV3S1A0A5B6 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC16.22■□□□□ 0.19
TCRBV3S1A0A5B6 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
TCRBV3S1A0A5B6 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
TCRBV3S1A0A5B6 MYB-242ENST00000618728 3545 ntTSL 5 BASIC16.22■□□□□ 0.19
TCRBV3S1A0A5B6 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TCRBV3S1A0A5B6 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
TCRBV3S1A0A5B6 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TCRBV3S1A0A5B6 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
TCRBV3S1A0A5B6 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
TCRBV3S1A0A5B6 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TCRBV3S1A0A5B6 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TCRBV3S1A0A5B6 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC16.22■□□□□ 0.19
TCRBV3S1A0A5B6 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TCRBV3S1A0A5B6 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TCRBV3S1A0A5B6 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
TCRBV3S1A0A5B6 COX5BP2-201ENST00000392354 334 ntBASIC16.22■□□□□ 0.19
TCRBV3S1A0A5B6 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC16.22■□□□□ 0.19
TCRBV3S1A0A5B6 AC107956.1-201ENST00000494359 873 ntBASIC16.22■□□□□ 0.19
TCRBV3S1A0A5B6 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC16.22■□□□□ 0.19
TCRBV3S1A0A5B6 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC16.22■□□□□ 0.19
TCRBV3S1A0A5B6 AC026471.5-201ENST00000615068 467 ntBASIC16.22■□□□□ 0.19
TCRBV3S1A0A5B6 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC16.22■□□□□ 0.19
TCRBV3S1A0A5B6 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
TCRBV3S1A0A5B6 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
TCRBV3S1A0A5B6 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TCRBV3S1A0A5B6 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
TCRBV3S1A0A5B6 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC16.22■□□□□ 0.19
TCRBV3S1A0A5B6 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
TCRBV3S1A0A5B6 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TCRBV3S1A0A5B6 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
TCRBV3S1A0A5B6 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
TCRBV3S1A0A5B6 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC16.22■□□□□ 0.19
TCRBV3S1A0A5B6 HYMAI-201ENST00000635591 3347 ntBASIC16.22■□□□□ 0.19
TCRBV3S1A0A5B6 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC16.22■□□□□ 0.19
TCRBV3S1A0A5B6 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TCRBV3S1A0A5B6 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
TCRBV3S1A0A5B6 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
TCRBV3S1A0A5B6 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TCRBV3S1A0A5B6 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC16.21■□□□□ 0.19
TCRBV3S1A0A5B6 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
TCRBV3S1A0A5B6 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC16.21■□□□□ 0.19
TCRBV3S1A0A5B6 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC16.21■□□□□ 0.19
TCRBV3S1A0A5B6 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC16.21■□□□□ 0.19
TCRBV3S1A0A5B6 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC16.21■□□□□ 0.19
TCRBV3S1A0A5B6 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TCRBV3S1A0A5B6 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TCRBV3S1A0A5B6 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
TCRBV3S1A0A5B6 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TCRBV3S1A0A5B6 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
TCRBV3S1A0A5B6 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TCRBV3S1A0A5B6 AL645728.1-201ENST00000366221 2101 ntBASIC16.21■□□□□ 0.19
TCRBV3S1A0A5B6 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC16.21■□□□□ 0.19
TCRBV3S1A0A5B6 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC16.21■□□□□ 0.19
TCRBV3S1A0A5B6 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TCRBV3S1A0A5B6 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC16.21■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 46.6 ms