Protein–RNA interactions for Protein: A0A1B0GTZ2

CCDC196, Putative coiled-coil domain-containing protein 196, humanhuman

Predictions only

Length 297 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC196A0A1B0GTZ2 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC20.15■□□□□ 0.82
CCDC196A0A1B0GTZ2 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CCDC196A0A1B0GTZ2 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CCDC196A0A1B0GTZ2 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC20.15■□□□□ 0.82
CCDC196A0A1B0GTZ2 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC20.15■□□□□ 0.82
CCDC196A0A1B0GTZ2 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
CCDC196A0A1B0GTZ2 CYB561-217ENST00000582997 877 ntTSL 5 BASIC20.15■□□□□ 0.82
CCDC196A0A1B0GTZ2 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC20.15■□□□□ 0.82
CCDC196A0A1B0GTZ2 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC20.15■□□□□ 0.82
CCDC196A0A1B0GTZ2 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CCDC196A0A1B0GTZ2 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
CCDC196A0A1B0GTZ2 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC20.15■□□□□ 0.82
CCDC196A0A1B0GTZ2 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
CCDC196A0A1B0GTZ2 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
CCDC196A0A1B0GTZ2 AC004817.3-201ENST00000602957 2129 ntBASIC20.15■□□□□ 0.82
CCDC196A0A1B0GTZ2 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CCDC196A0A1B0GTZ2 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
CCDC196A0A1B0GTZ2 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CCDC196A0A1B0GTZ2 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
CCDC196A0A1B0GTZ2 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.82
CCDC196A0A1B0GTZ2 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.82
CCDC196A0A1B0GTZ2 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
CCDC196A0A1B0GTZ2 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC20.14■□□□□ 0.82
CCDC196A0A1B0GTZ2 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CCDC196A0A1B0GTZ2 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
CCDC196A0A1B0GTZ2 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
CCDC196A0A1B0GTZ2 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
CCDC196A0A1B0GTZ2 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
CCDC196A0A1B0GTZ2 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC20.14■□□□□ 0.81
CCDC196A0A1B0GTZ2 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CCDC196A0A1B0GTZ2 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CCDC196A0A1B0GTZ2 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
CCDC196A0A1B0GTZ2 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC20.14■□□□□ 0.81
CCDC196A0A1B0GTZ2 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC20.14■□□□□ 0.81
CCDC196A0A1B0GTZ2 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CCDC196A0A1B0GTZ2 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CCDC196A0A1B0GTZ2 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC20.14■□□□□ 0.81
CCDC196A0A1B0GTZ2 SLC25A1P3-201ENST00000395415 828 ntBASIC20.14■□□□□ 0.81
CCDC196A0A1B0GTZ2 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
CCDC196A0A1B0GTZ2 HIST2H3DP1-201ENST00000401004 416 ntBASIC20.14■□□□□ 0.81
CCDC196A0A1B0GTZ2 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC20.14■□□□□ 0.81
CCDC196A0A1B0GTZ2 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
CCDC196A0A1B0GTZ2 MSRA-206ENST00000521209 814 ntTSL 3 BASIC20.14■□□□□ 0.81
CCDC196A0A1B0GTZ2 KRT126P-201ENST00000549467 1181 ntBASIC20.14■□□□□ 0.81
CCDC196A0A1B0GTZ2 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
CCDC196A0A1B0GTZ2 AL691432.3-201ENST00000621860 400 ntBASIC20.14■□□□□ 0.81
CCDC196A0A1B0GTZ2 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC20.14■□□□□ 0.81
CCDC196A0A1B0GTZ2 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CCDC196A0A1B0GTZ2 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
CCDC196A0A1B0GTZ2 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CCDC196A0A1B0GTZ2 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC20.14■□□□□ 0.81
CCDC196A0A1B0GTZ2 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC20.14■□□□□ 0.81
CCDC196A0A1B0GTZ2 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CCDC196A0A1B0GTZ2 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CCDC196A0A1B0GTZ2 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC20.14■□□□□ 0.81
CCDC196A0A1B0GTZ2 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC20.14■□□□□ 0.81
CCDC196A0A1B0GTZ2 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC20.14■□□□□ 0.81
CCDC196A0A1B0GTZ2 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC20.14■□□□□ 0.81
CCDC196A0A1B0GTZ2 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
CCDC196A0A1B0GTZ2 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
CCDC196A0A1B0GTZ2 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
CCDC196A0A1B0GTZ2 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC20.13■□□□□ 0.81
CCDC196A0A1B0GTZ2 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC20.13■□□□□ 0.81
CCDC196A0A1B0GTZ2 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CCDC196A0A1B0GTZ2 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC20.13■□□□□ 0.81
CCDC196A0A1B0GTZ2 NCF1C-201ENST00000438382 1427 ntBASIC20.13■□□□□ 0.81
CCDC196A0A1B0GTZ2 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CCDC196A0A1B0GTZ2 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC20.13■□□□□ 0.81
CCDC196A0A1B0GTZ2 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CCDC196A0A1B0GTZ2 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CCDC196A0A1B0GTZ2 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC20.13■□□□□ 0.81
CCDC196A0A1B0GTZ2 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CCDC196A0A1B0GTZ2 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CCDC196A0A1B0GTZ2 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC20.13■□□□□ 0.81
CCDC196A0A1B0GTZ2 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC20.13■□□□□ 0.81
CCDC196A0A1B0GTZ2 SART3-203ENST00000546611 1184 ntBASIC20.13■□□□□ 0.81
CCDC196A0A1B0GTZ2 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC20.13■□□□□ 0.81
CCDC196A0A1B0GTZ2 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC20.13■□□□□ 0.81
CCDC196A0A1B0GTZ2 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC20.13■□□□□ 0.81
CCDC196A0A1B0GTZ2 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC20.13■□□□□ 0.81
CCDC196A0A1B0GTZ2 AL589182.2-201ENST00000619332 1049 ntBASIC20.13■□□□□ 0.81
CCDC196A0A1B0GTZ2 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
CCDC196A0A1B0GTZ2 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC20.13■□□□□ 0.81
CCDC196A0A1B0GTZ2 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC20.13■□□□□ 0.81
CCDC196A0A1B0GTZ2 RHBDF1P1-201ENST00000427504 1941 ntBASIC20.13■□□□□ 0.81
CCDC196A0A1B0GTZ2 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
CCDC196A0A1B0GTZ2 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC20.13■□□□□ 0.81
CCDC196A0A1B0GTZ2 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
CCDC196A0A1B0GTZ2 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CCDC196A0A1B0GTZ2 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
CCDC196A0A1B0GTZ2 LINC02012-201ENST00000608206 1725 ntBASIC20.13■□□□□ 0.81
CCDC196A0A1B0GTZ2 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC20.13■□□□□ 0.81
CCDC196A0A1B0GTZ2 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CCDC196A0A1B0GTZ2 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CCDC196A0A1B0GTZ2 EGFEM1P-202ENST00000431685 1563 ntBASIC20.12■□□□□ 0.81
CCDC196A0A1B0GTZ2 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
CCDC196A0A1B0GTZ2 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CCDC196A0A1B0GTZ2 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC20.12■□□□□ 0.81
CCDC196A0A1B0GTZ2 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CCDC196A0A1B0GTZ2 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 43.2 ms