Protein–RNA interactions for Protein: A0A0A0MS04

TRBV6-7, T-cell receptor beta variable 6-7 (non-functional) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-7A0A0A0MS04 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
TRBV6-7A0A0A0MS04 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
TRBV6-7A0A0A0MS04 LINC00554-201ENST00000564841 3011 ntBASIC14.54□□□□□ -0.08
TRBV6-7A0A0A0MS04 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
TRBV6-7A0A0A0MS04 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC14.54□□□□□ -0.08
TRBV6-7A0A0A0MS04 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC14.54□□□□□ -0.08
TRBV6-7A0A0A0MS04 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC14.53□□□□□ -0.08
TRBV6-7A0A0A0MS04 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRBV6-7A0A0A0MS04 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRBV6-7A0A0A0MS04 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
TRBV6-7A0A0A0MS04 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC14.53□□□□□ -0.08
TRBV6-7A0A0A0MS04 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRBV6-7A0A0A0MS04 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC14.53□□□□□ -0.08
TRBV6-7A0A0A0MS04 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRBV6-7A0A0A0MS04 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC14.53□□□□□ -0.08
TRBV6-7A0A0A0MS04 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
TRBV6-7A0A0A0MS04 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRBV6-7A0A0A0MS04 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRBV6-7A0A0A0MS04 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
TRBV6-7A0A0A0MS04 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC14.53□□□□□ -0.08
TRBV6-7A0A0A0MS04 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRBV6-7A0A0A0MS04 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
TRBV6-7A0A0A0MS04 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRBV6-7A0A0A0MS04 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRBV6-7A0A0A0MS04 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
TRBV6-7A0A0A0MS04 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRBV6-7A0A0A0MS04 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRBV6-7A0A0A0MS04 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRBV6-7A0A0A0MS04 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRBV6-7A0A0A0MS04 COPE-203ENST00000351079 907 ntTSL 2 BASIC14.53□□□□□ -0.08
TRBV6-7A0A0A0MS04 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC14.53□□□□□ -0.08
TRBV6-7A0A0A0MS04 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRBV6-7A0A0A0MS04 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
TRBV6-7A0A0A0MS04 COX5BP2-201ENST00000392354 334 ntBASIC14.53□□□□□ -0.08
TRBV6-7A0A0A0MS04 AC113347.1-201ENST00000413321 391 ntBASIC14.53□□□□□ -0.08
TRBV6-7A0A0A0MS04 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC14.53□□□□□ -0.08
TRBV6-7A0A0A0MS04 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRBV6-7A0A0A0MS04 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
TRBV6-7A0A0A0MS04 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC14.53□□□□□ -0.08
TRBV6-7A0A0A0MS04 TK1-204ENST00000590430 683 ntTSL 3 BASIC14.53□□□□□ -0.08
TRBV6-7A0A0A0MS04 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
TRBV6-7A0A0A0MS04 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRBV6-7A0A0A0MS04 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRBV6-7A0A0A0MS04 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRBV6-7A0A0A0MS04 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
TRBV6-7A0A0A0MS04 AC105917.1-201ENST00000506637 2539 ntBASIC14.53□□□□□ -0.08
TRBV6-7A0A0A0MS04 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRBV6-7A0A0A0MS04 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRBV6-7A0A0A0MS04 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
TRBV6-7A0A0A0MS04 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRBV6-7A0A0A0MS04 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC14.53□□□□□ -0.08
TRBV6-7A0A0A0MS04 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
TRBV6-7A0A0A0MS04 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC14.53□□□□□ -0.08
TRBV6-7A0A0A0MS04 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC14.53□□□□□ -0.08
TRBV6-7A0A0A0MS04 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRBV6-7A0A0A0MS04 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC14.52□□□□□ -0.08
TRBV6-7A0A0A0MS04 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
TRBV6-7A0A0A0MS04 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
TRBV6-7A0A0A0MS04 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
TRBV6-7A0A0A0MS04 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
TRBV6-7A0A0A0MS04 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
TRBV6-7A0A0A0MS04 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
TRBV6-7A0A0A0MS04 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
TRBV6-7A0A0A0MS04 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
TRBV6-7A0A0A0MS04 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
TRBV6-7A0A0A0MS04 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC14.52□□□□□ -0.08
TRBV6-7A0A0A0MS04 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC14.52□□□□□ -0.09
TRBV6-7A0A0A0MS04 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
TRBV6-7A0A0A0MS04 HBZP1-201ENST00000354915 429 ntBASIC14.52□□□□□ -0.09
TRBV6-7A0A0A0MS04 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC14.52□□□□□ -0.09
TRBV6-7A0A0A0MS04 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
TRBV6-7A0A0A0MS04 GXYLT1P3-201ENST00000453058 1193 ntBASIC14.52□□□□□ -0.09
TRBV6-7A0A0A0MS04 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
TRBV6-7A0A0A0MS04 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC14.52□□□□□ -0.09
TRBV6-7A0A0A0MS04 AC093827.2-201ENST00000512654 315 ntBASIC14.52□□□□□ -0.09
TRBV6-7A0A0A0MS04 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC14.52□□□□□ -0.09
TRBV6-7A0A0A0MS04 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
TRBV6-7A0A0A0MS04 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
TRBV6-7A0A0A0MS04 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC14.52□□□□□ -0.09
TRBV6-7A0A0A0MS04 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
TRBV6-7A0A0A0MS04 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
TRBV6-7A0A0A0MS04 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
TRBV6-7A0A0A0MS04 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
TRBV6-7A0A0A0MS04 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
TRBV6-7A0A0A0MS04 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
TRBV6-7A0A0A0MS04 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
TRBV6-7A0A0A0MS04 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC14.52□□□□□ -0.09
TRBV6-7A0A0A0MS04 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC14.52□□□□□ -0.09
TRBV6-7A0A0A0MS04 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
TRBV6-7A0A0A0MS04 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
TRBV6-7A0A0A0MS04 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC14.52□□□□□ -0.09
TRBV6-7A0A0A0MS04 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
TRBV6-7A0A0A0MS04 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
TRBV6-7A0A0A0MS04 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
TRBV6-7A0A0A0MS04 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
TRBV6-7A0A0A0MS04 LINC02012-201ENST00000608206 1725 ntBASIC14.52□□□□□ -0.09
TRBV6-7A0A0A0MS04 BANP-201ENST00000286122 2368 ntTSL 5 BASIC14.52□□□□□ -0.09
TRBV6-7A0A0A0MS04 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
TRBV6-7A0A0A0MS04 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
TRBV6-7A0A0A0MS04 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 52.6 ms