Protein–RNA interactions for Protein: Q9Y5G3

PCDHGB1, Protocadherin gamma-B1, humanhuman

Predictions only

Length 927 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB1Q9Y5G3 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
PCDHGB1Q9Y5G3 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
PCDHGB1Q9Y5G3 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
PCDHGB1Q9Y5G3 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
PCDHGB1Q9Y5G3 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
PCDHGB1Q9Y5G3 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC15.95■□□□□ 0.14
PCDHGB1Q9Y5G3 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
PCDHGB1Q9Y5G3 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
PCDHGB1Q9Y5G3 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
PCDHGB1Q9Y5G3 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
PCDHGB1Q9Y5G3 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC15.94■□□□□ 0.14
PCDHGB1Q9Y5G3 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
PCDHGB1Q9Y5G3 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
PCDHGB1Q9Y5G3 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC15.94■□□□□ 0.14
PCDHGB1Q9Y5G3 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
PCDHGB1Q9Y5G3 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
PCDHGB1Q9Y5G3 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
PCDHGB1Q9Y5G3 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
PCDHGB1Q9Y5G3 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC15.94■□□□□ 0.14
PCDHGB1Q9Y5G3 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC15.94■□□□□ 0.14
PCDHGB1Q9Y5G3 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC15.94■□□□□ 0.14
PCDHGB1Q9Y5G3 GRAP-204ENST00000573099 846 ntTSL 3 BASIC15.94■□□□□ 0.14
PCDHGB1Q9Y5G3 AC092865.7-201ENST00000641832 219 ntBASIC15.94■□□□□ 0.14
PCDHGB1Q9Y5G3 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC15.94■□□□□ 0.14
PCDHGB1Q9Y5G3 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
PCDHGB1Q9Y5G3 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC15.94■□□□□ 0.14
PCDHGB1Q9Y5G3 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC15.94■□□□□ 0.14
PCDHGB1Q9Y5G3 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
PCDHGB1Q9Y5G3 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
PCDHGB1Q9Y5G3 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
PCDHGB1Q9Y5G3 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC15.94■□□□□ 0.14
PCDHGB1Q9Y5G3 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
PCDHGB1Q9Y5G3 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
PCDHGB1Q9Y5G3 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC15.94■□□□□ 0.14
PCDHGB1Q9Y5G3 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC15.94■□□□□ 0.14
PCDHGB1Q9Y5G3 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
PCDHGB1Q9Y5G3 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
PCDHGB1Q9Y5G3 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
PCDHGB1Q9Y5G3 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
PCDHGB1Q9Y5G3 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
PCDHGB1Q9Y5G3 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
PCDHGB1Q9Y5G3 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC15.93■□□□□ 0.14
PCDHGB1Q9Y5G3 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
PCDHGB1Q9Y5G3 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
PCDHGB1Q9Y5G3 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
PCDHGB1Q9Y5G3 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
PCDHGB1Q9Y5G3 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC15.93■□□□□ 0.14
PCDHGB1Q9Y5G3 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
PCDHGB1Q9Y5G3 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC15.93■□□□□ 0.14
PCDHGB1Q9Y5G3 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
PCDHGB1Q9Y5G3 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
PCDHGB1Q9Y5G3 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
PCDHGB1Q9Y5G3 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC15.93■□□□□ 0.14
PCDHGB1Q9Y5G3 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
PCDHGB1Q9Y5G3 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC15.93■□□□□ 0.14
PCDHGB1Q9Y5G3 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC15.93■□□□□ 0.14
PCDHGB1Q9Y5G3 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC15.93■□□□□ 0.14
PCDHGB1Q9Y5G3 REXO1L10P-201ENST00000615707 1290 ntBASIC15.93■□□□□ 0.14
PCDHGB1Q9Y5G3 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
PCDHGB1Q9Y5G3 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
PCDHGB1Q9Y5G3 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
PCDHGB1Q9Y5G3 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC15.93■□□□□ 0.14
PCDHGB1Q9Y5G3 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC15.93■□□□□ 0.14
PCDHGB1Q9Y5G3 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC15.93■□□□□ 0.14
PCDHGB1Q9Y5G3 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC15.93■□□□□ 0.14
PCDHGB1Q9Y5G3 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC15.93■□□□□ 0.14
PCDHGB1Q9Y5G3 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC15.93■□□□□ 0.14
PCDHGB1Q9Y5G3 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC15.93■□□□□ 0.14
PCDHGB1Q9Y5G3 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
PCDHGB1Q9Y5G3 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
PCDHGB1Q9Y5G3 CES3-203ENST00000543856 3178 ntTSL 2 BASIC15.92■□□□□ 0.14
PCDHGB1Q9Y5G3 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
PCDHGB1Q9Y5G3 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
PCDHGB1Q9Y5G3 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
PCDHGB1Q9Y5G3 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
PCDHGB1Q9Y5G3 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
PCDHGB1Q9Y5G3 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
PCDHGB1Q9Y5G3 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC15.92■□□□□ 0.14
PCDHGB1Q9Y5G3 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
PCDHGB1Q9Y5G3 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
PCDHGB1Q9Y5G3 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
PCDHGB1Q9Y5G3 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC15.92■□□□□ 0.14
PCDHGB1Q9Y5G3 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
PCDHGB1Q9Y5G3 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
PCDHGB1Q9Y5G3 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
PCDHGB1Q9Y5G3 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
PCDHGB1Q9Y5G3 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
PCDHGB1Q9Y5G3 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC15.92■□□□□ 0.14
PCDHGB1Q9Y5G3 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
PCDHGB1Q9Y5G3 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
PCDHGB1Q9Y5G3 AC005363.2-201ENST00000618631 242 ntBASIC15.92■□□□□ 0.14
PCDHGB1Q9Y5G3 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC15.92■□□□□ 0.14
PCDHGB1Q9Y5G3 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC15.92■□□□□ 0.14
PCDHGB1Q9Y5G3 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
PCDHGB1Q9Y5G3 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
PCDHGB1Q9Y5G3 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC15.92■□□□□ 0.14
PCDHGB1Q9Y5G3 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
PCDHGB1Q9Y5G3 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC15.92■□□□□ 0.14
PCDHGB1Q9Y5G3 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC15.92■□□□□ 0.14
PCDHGB1Q9Y5G3 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 85.5 ms