Protein–RNA interactions for Protein: Q9UN66

PCDHB8, Protocadherin beta-8, humanhuman

Predictions only

Length 801 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB8Q9UN66 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC18.45■□□□□ 0.54
PCDHB8Q9UN66 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC18.45■□□□□ 0.54
PCDHB8Q9UN66 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PCDHB8Q9UN66 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC18.44■□□□□ 0.54
PCDHB8Q9UN66 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
PCDHB8Q9UN66 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC18.44■□□□□ 0.54
PCDHB8Q9UN66 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
PCDHB8Q9UN66 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC18.44■□□□□ 0.54
PCDHB8Q9UN66 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PCDHB8Q9UN66 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PCDHB8Q9UN66 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
PCDHB8Q9UN66 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
PCDHB8Q9UN66 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
PCDHB8Q9UN66 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
PCDHB8Q9UN66 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
PCDHB8Q9UN66 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PCDHB8Q9UN66 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
PCDHB8Q9UN66 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC18.44■□□□□ 0.54
PCDHB8Q9UN66 YBX2P1-201ENST00000394192 760 ntBASIC18.44■□□□□ 0.54
PCDHB8Q9UN66 PMP22-202ENST00000395936 816 ntTSL 3 BASIC18.44■□□□□ 0.54
PCDHB8Q9UN66 NABP1-203ENST00000409510 843 ntTSL 5 BASIC18.44■□□□□ 0.54
PCDHB8Q9UN66 ATP6V0CP3-201ENST00000417255 467 ntBASIC18.44■□□□□ 0.54
PCDHB8Q9UN66 AC023274.1-201ENST00000418278 595 ntBASIC18.44■□□□□ 0.54
PCDHB8Q9UN66 AC004832.2-201ENST00000426397 482 ntBASIC18.44■□□□□ 0.54
PCDHB8Q9UN66 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC18.44■□□□□ 0.54
PCDHB8Q9UN66 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC18.44■□□□□ 0.54
PCDHB8Q9UN66 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC18.44■□□□□ 0.54
PCDHB8Q9UN66 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC18.44■□□□□ 0.54
PCDHB8Q9UN66 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC18.44■□□□□ 0.54
PCDHB8Q9UN66 ETFRF1-207ENST00000556351 838 ntAPPRIS ALT1 TSL 2 BASIC18.44■□□□□ 0.54
PCDHB8Q9UN66 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC18.44■□□□□ 0.54
PCDHB8Q9UN66 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC18.44■□□□□ 0.54
PCDHB8Q9UN66 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC18.44■□□□□ 0.54
PCDHB8Q9UN66 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
PCDHB8Q9UN66 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC18.44■□□□□ 0.54
PCDHB8Q9UN66 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC18.44■□□□□ 0.54
PCDHB8Q9UN66 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
PCDHB8Q9UN66 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PCDHB8Q9UN66 LYSMD4-203ENST00000378904 2122 ntBASIC18.44■□□□□ 0.54
PCDHB8Q9UN66 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
PCDHB8Q9UN66 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
PCDHB8Q9UN66 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
PCDHB8Q9UN66 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
PCDHB8Q9UN66 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC18.44■□□□□ 0.54
PCDHB8Q9UN66 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC18.44■□□□□ 0.54
PCDHB8Q9UN66 AC133963.1-201ENST00000504166 1679 ntBASIC18.44■□□□□ 0.54
PCDHB8Q9UN66 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
PCDHB8Q9UN66 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
PCDHB8Q9UN66 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC18.44■□□□□ 0.54
PCDHB8Q9UN66 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
PCDHB8Q9UN66 AC022762.2-201ENST00000600308 1353 ntBASIC18.43■□□□□ 0.54
PCDHB8Q9UN66 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
PCDHB8Q9UN66 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC18.43■□□□□ 0.54
PCDHB8Q9UN66 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
PCDHB8Q9UN66 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
PCDHB8Q9UN66 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC18.43■□□□□ 0.54
PCDHB8Q9UN66 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC18.43■□□□□ 0.54
PCDHB8Q9UN66 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
PCDHB8Q9UN66 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
PCDHB8Q9UN66 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
PCDHB8Q9UN66 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
PCDHB8Q9UN66 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC18.43■□□□□ 0.54
PCDHB8Q9UN66 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC18.43■□□□□ 0.54
PCDHB8Q9UN66 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC18.43■□□□□ 0.54
PCDHB8Q9UN66 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC18.43■□□□□ 0.54
PCDHB8Q9UN66 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC18.43■□□□□ 0.54
PCDHB8Q9UN66 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC18.43■□□□□ 0.54
PCDHB8Q9UN66 AL109620.1-201ENST00000618738 1197 ntBASIC18.43■□□□□ 0.54
PCDHB8Q9UN66 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
PCDHB8Q9UN66 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC18.43■□□□□ 0.54
PCDHB8Q9UN66 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
PCDHB8Q9UN66 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
PCDHB8Q9UN66 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC18.43■□□□□ 0.54
PCDHB8Q9UN66 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC18.43■□□□□ 0.54
PCDHB8Q9UN66 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
PCDHB8Q9UN66 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC18.43■□□□□ 0.54
PCDHB8Q9UN66 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
PCDHB8Q9UN66 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
PCDHB8Q9UN66 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
PCDHB8Q9UN66 PI4KAP1-204ENST00000612579 1703 ntBASIC18.43■□□□□ 0.54
PCDHB8Q9UN66 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
PCDHB8Q9UN66 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
PCDHB8Q9UN66 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
PCDHB8Q9UN66 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC18.42■□□□□ 0.54
PCDHB8Q9UN66 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PCDHB8Q9UN66 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
PCDHB8Q9UN66 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC18.42■□□□□ 0.54
PCDHB8Q9UN66 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
PCDHB8Q9UN66 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC18.42■□□□□ 0.54
PCDHB8Q9UN66 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
PCDHB8Q9UN66 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PCDHB8Q9UN66 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
PCDHB8Q9UN66 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC18.42■□□□□ 0.54
PCDHB8Q9UN66 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
PCDHB8Q9UN66 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PCDHB8Q9UN66 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PCDHB8Q9UN66 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
PCDHB8Q9UN66 UPF3AP3-201ENST00000420996 769 ntBASIC18.42■□□□□ 0.54
PCDHB8Q9UN66 YY1P1-201ENST00000427625 668 ntBASIC18.42■□□□□ 0.54
PCDHB8Q9UN66 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC18.42■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 20.7 ms