Protein–RNA interactions for Protein: Q9ULT6

ZNRF3, E3 ubiquitin-protein ligase ZNRF3, humanhuman

Predictions only

Length 936 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNRF3Q9ULT6 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC20.65■□□□□ 0.9
ZNRF3Q9ULT6 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC20.65■□□□□ 0.9
ZNRF3Q9ULT6 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
ZNRF3Q9ULT6 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC20.65■□□□□ 0.9
ZNRF3Q9ULT6 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC20.65■□□□□ 0.9
ZNRF3Q9ULT6 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC20.65■□□□□ 0.9
ZNRF3Q9ULT6 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
ZNRF3Q9ULT6 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
ZNRF3Q9ULT6 GRAP-202ENST00000395635 834 ntTSL 2 BASIC20.65■□□□□ 0.9
ZNRF3Q9ULT6 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC20.65■□□□□ 0.9
ZNRF3Q9ULT6 ALG1L8P-201ENST00000533887 760 ntBASIC20.65■□□□□ 0.9
ZNRF3Q9ULT6 MNT-208ENST00000575394 606 ntTSL 4 BASIC20.65■□□□□ 0.9
ZNRF3Q9ULT6 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
ZNRF3Q9ULT6 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC20.65■□□□□ 0.9
ZNRF3Q9ULT6 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
ZNRF3Q9ULT6 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC20.65■□□□□ 0.9
ZNRF3Q9ULT6 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
ZNRF3Q9ULT6 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC20.65■□□□□ 0.9
ZNRF3Q9ULT6 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC20.65■□□□□ 0.9
ZNRF3Q9ULT6 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.9
ZNRF3Q9ULT6 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.9
ZNRF3Q9ULT6 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
ZNRF3Q9ULT6 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
ZNRF3Q9ULT6 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC20.64■□□□□ 0.9
ZNRF3Q9ULT6 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
ZNRF3Q9ULT6 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
ZNRF3Q9ULT6 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
ZNRF3Q9ULT6 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC20.64■□□□□ 0.89
ZNRF3Q9ULT6 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC20.64■□□□□ 0.89
ZNRF3Q9ULT6 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
ZNRF3Q9ULT6 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC20.64■□□□□ 0.89
ZNRF3Q9ULT6 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC20.64■□□□□ 0.89
ZNRF3Q9ULT6 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC20.64■□□□□ 0.89
ZNRF3Q9ULT6 AC092580.3-201ENST00000430932 139 ntBASIC20.64■□□□□ 0.89
ZNRF3Q9ULT6 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC20.64■□□□□ 0.89
ZNRF3Q9ULT6 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
ZNRF3Q9ULT6 COQ6-210ENST00000554920 649 ntTSL 3 BASIC20.64■□□□□ 0.89
ZNRF3Q9ULT6 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC20.64■□□□□ 0.89
ZNRF3Q9ULT6 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC20.64■□□□□ 0.89
ZNRF3Q9ULT6 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC20.64■□□□□ 0.89
ZNRF3Q9ULT6 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
ZNRF3Q9ULT6 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC20.64■□□□□ 0.89
ZNRF3Q9ULT6 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC20.64■□□□□ 0.89
ZNRF3Q9ULT6 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
ZNRF3Q9ULT6 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
ZNRF3Q9ULT6 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC20.64■□□□□ 0.89
ZNRF3Q9ULT6 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC20.64■□□□□ 0.89
ZNRF3Q9ULT6 USP49-202ENST00000373010 2446 ntTSL 5 BASIC20.64■□□□□ 0.89
ZNRF3Q9ULT6 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
ZNRF3Q9ULT6 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
ZNRF3Q9ULT6 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
ZNRF3Q9ULT6 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
ZNRF3Q9ULT6 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
ZNRF3Q9ULT6 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC20.63■□□□□ 0.89
ZNRF3Q9ULT6 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
ZNRF3Q9ULT6 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
ZNRF3Q9ULT6 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC20.63■□□□□ 0.89
ZNRF3Q9ULT6 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
ZNRF3Q9ULT6 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC20.63■□□□□ 0.89
ZNRF3Q9ULT6 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC20.63■□□□□ 0.89
ZNRF3Q9ULT6 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
ZNRF3Q9ULT6 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
ZNRF3Q9ULT6 GNAS-203ENST00000306120 1878 ntBASIC20.63■□□□□ 0.89
ZNRF3Q9ULT6 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC20.63■□□□□ 0.89
ZNRF3Q9ULT6 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
ZNRF3Q9ULT6 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC20.63■□□□□ 0.89
ZNRF3Q9ULT6 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC20.63■□□□□ 0.89
ZNRF3Q9ULT6 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
ZNRF3Q9ULT6 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
ZNRF3Q9ULT6 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
ZNRF3Q9ULT6 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
ZNRF3Q9ULT6 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
ZNRF3Q9ULT6 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
ZNRF3Q9ULT6 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
ZNRF3Q9ULT6 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC20.63■□□□□ 0.89
ZNRF3Q9ULT6 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC20.63■□□□□ 0.89
ZNRF3Q9ULT6 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
ZNRF3Q9ULT6 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
ZNRF3Q9ULT6 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
ZNRF3Q9ULT6 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC20.63■□□□□ 0.89
ZNRF3Q9ULT6 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC20.62■□□□□ 0.89
ZNRF3Q9ULT6 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
ZNRF3Q9ULT6 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC20.62■□□□□ 0.89
ZNRF3Q9ULT6 WASH6P-202ENST00000359512 1437 ntBASIC20.62■□□□□ 0.89
ZNRF3Q9ULT6 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
ZNRF3Q9ULT6 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC20.62■□□□□ 0.89
ZNRF3Q9ULT6 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC20.62■□□□□ 0.89
ZNRF3Q9ULT6 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
ZNRF3Q9ULT6 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
ZNRF3Q9ULT6 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC20.62■□□□□ 0.89
ZNRF3Q9ULT6 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
ZNRF3Q9ULT6 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
ZNRF3Q9ULT6 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC20.62■□□□□ 0.89
ZNRF3Q9ULT6 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
ZNRF3Q9ULT6 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
ZNRF3Q9ULT6 CR383656.12-201ENST00000549567 513 ntBASIC20.62■□□□□ 0.89
ZNRF3Q9ULT6 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC20.62■□□□□ 0.89
ZNRF3Q9ULT6 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC20.62■□□□□ 0.89
ZNRF3Q9ULT6 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC20.62■□□□□ 0.89
ZNRF3Q9ULT6 AC027307.3-201ENST00000594262 1100 ntBASIC20.62■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms