Protein–RNA interactions for Protein: Q9UIS9

MBD1, Methyl-CpG-binding domain protein 1, humanhuman

Predicted RBP Predictions only

Length 605 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1Q9UIS9 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC17.42■□□□□ 0.38
MBD1Q9UIS9 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
MBD1Q9UIS9 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
MBD1Q9UIS9 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
MBD1Q9UIS9 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
MBD1Q9UIS9 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
MBD1Q9UIS9 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC17.42■□□□□ 0.38
MBD1Q9UIS9 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC17.42■□□□□ 0.38
MBD1Q9UIS9 RHOQP3-201ENST00000437982 621 ntBASIC17.42■□□□□ 0.38
MBD1Q9UIS9 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
MBD1Q9UIS9 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC17.42■□□□□ 0.38
MBD1Q9UIS9 CD63-210ENST00000550776 870 ntTSL 5 BASIC17.42■□□□□ 0.38
MBD1Q9UIS9 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC17.42■□□□□ 0.38
MBD1Q9UIS9 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC17.42■□□□□ 0.38
MBD1Q9UIS9 AL353135.1-201ENST00000606729 504 ntBASIC17.42■□□□□ 0.38
MBD1Q9UIS9 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC17.42■□□□□ 0.38
MBD1Q9UIS9 AC106028.4-201ENST00000614509 607 ntBASIC17.42■□□□□ 0.38
MBD1Q9UIS9 ORC5-208ENST00000626700 344 ntTSL 3 BASIC17.42■□□□□ 0.38
MBD1Q9UIS9 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
MBD1Q9UIS9 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
MBD1Q9UIS9 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
MBD1Q9UIS9 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
MBD1Q9UIS9 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC17.42■□□□□ 0.38
MBD1Q9UIS9 AR-207ENST00000612010 3896 ntTSL 5 BASIC17.42■□□□□ 0.38
MBD1Q9UIS9 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
MBD1Q9UIS9 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
MBD1Q9UIS9 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
MBD1Q9UIS9 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
MBD1Q9UIS9 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
MBD1Q9UIS9 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
MBD1Q9UIS9 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
MBD1Q9UIS9 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
MBD1Q9UIS9 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
MBD1Q9UIS9 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC17.42■□□□□ 0.38
MBD1Q9UIS9 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
MBD1Q9UIS9 PP12613-201ENST00000424958 2230 ntBASIC17.41■□□□□ 0.38
MBD1Q9UIS9 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC17.41■□□□□ 0.38
MBD1Q9UIS9 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
MBD1Q9UIS9 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
MBD1Q9UIS9 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC17.41■□□□□ 0.38
MBD1Q9UIS9 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC17.41■□□□□ 0.38
MBD1Q9UIS9 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
MBD1Q9UIS9 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
MBD1Q9UIS9 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
MBD1Q9UIS9 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
MBD1Q9UIS9 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
MBD1Q9UIS9 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
MBD1Q9UIS9 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
MBD1Q9UIS9 AP002414.1-201ENST00000391405 1147 ntBASIC17.41■□□□□ 0.38
MBD1Q9UIS9 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC17.41■□□□□ 0.38
MBD1Q9UIS9 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
MBD1Q9UIS9 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC17.41■□□□□ 0.38
MBD1Q9UIS9 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
MBD1Q9UIS9 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC17.41■□□□□ 0.38
MBD1Q9UIS9 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC17.41■□□□□ 0.38
MBD1Q9UIS9 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC17.41■□□□□ 0.38
MBD1Q9UIS9 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
MBD1Q9UIS9 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
MBD1Q9UIS9 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
MBD1Q9UIS9 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC17.41■□□□□ 0.38
MBD1Q9UIS9 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
MBD1Q9UIS9 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
MBD1Q9UIS9 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
MBD1Q9UIS9 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
MBD1Q9UIS9 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
MBD1Q9UIS9 LINC00896-202ENST00000609602 2128 ntBASIC17.41■□□□□ 0.38
MBD1Q9UIS9 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
MBD1Q9UIS9 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
MBD1Q9UIS9 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC17.4■□□□□ 0.38
MBD1Q9UIS9 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC17.4■□□□□ 0.38
MBD1Q9UIS9 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
MBD1Q9UIS9 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
MBD1Q9UIS9 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC17.4■□□□□ 0.38
MBD1Q9UIS9 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
MBD1Q9UIS9 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
MBD1Q9UIS9 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
MBD1Q9UIS9 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC17.4■□□□□ 0.38
MBD1Q9UIS9 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
MBD1Q9UIS9 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC17.4■□□□□ 0.38
MBD1Q9UIS9 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
MBD1Q9UIS9 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC17.4■□□□□ 0.38
MBD1Q9UIS9 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
MBD1Q9UIS9 ATP6V0CP3-201ENST00000417255 467 ntBASIC17.4■□□□□ 0.38
MBD1Q9UIS9 LINC00982-205ENST00000420957 435 ntBASIC17.4■□□□□ 0.38
MBD1Q9UIS9 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC17.4■□□□□ 0.38
MBD1Q9UIS9 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC17.4■□□□□ 0.38
MBD1Q9UIS9 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
MBD1Q9UIS9 SMN2-210ENST00000511812 867 ntTSL 2 BASIC17.4■□□□□ 0.38
MBD1Q9UIS9 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
MBD1Q9UIS9 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
MBD1Q9UIS9 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC17.4■□□□□ 0.38
MBD1Q9UIS9 METTL23-205ENST00000588302 925 ntTSL 5 BASIC17.4■□□□□ 0.38
MBD1Q9UIS9 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC17.4■□□□□ 0.38
MBD1Q9UIS9 BX276092.7-203ENST00000637198 1536 ntBASIC17.4■□□□□ 0.38
MBD1Q9UIS9 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
MBD1Q9UIS9 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC17.4■□□□□ 0.38
MBD1Q9UIS9 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
MBD1Q9UIS9 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC17.4■□□□□ 0.38
MBD1Q9UIS9 AC009336.1-201ENST00000608941 1553 ntBASIC17.4■□□□□ 0.38
MBD1Q9UIS9 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC17.4■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms