Protein–RNA interactions for Protein: Q9UFD9

RIMBP3, RIMS-binding protein 3A, humanhuman

Predictions only

Length 1,639 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIMBP3Q9UFD9 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC27.11■■□□□ 1.93
RIMBP3Q9UFD9 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC27.11■■□□□ 1.93
RIMBP3Q9UFD9 IGHV3-21-201ENST00000390607 430 ntAPPRIS P1 BASIC27.11■■□□□ 1.93
RIMBP3Q9UFD9 LINC01248-201ENST00000458264 468 ntTSL 3 BASIC27.11■■□□□ 1.93
RIMBP3Q9UFD9 RN7SL618P-201ENST00000477850 296 ntBASIC27.11■■□□□ 1.93
RIMBP3Q9UFD9 AP001889.1-201ENST00000525414 633 ntBASIC27.11■■□□□ 1.93
RIMBP3Q9UFD9 AC084859.1-201ENST00000533002 670 ntTSL 4 BASIC27.11■■□□□ 1.93
RIMBP3Q9UFD9 DBNDD1-206ENST00000568838 993 ntTSL 2 BASIC27.11■■□□□ 1.93
RIMBP3Q9UFD9 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC27.11■■□□□ 1.93
RIMBP3Q9UFD9 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC27.11■■□□□ 1.93
RIMBP3Q9UFD9 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC27.11■■□□□ 1.93
RIMBP3Q9UFD9 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC27.1■■□□□ 1.93
RIMBP3Q9UFD9 ENSA-206ENST00000361631 725 ntTSL 2 BASIC27.1■■□□□ 1.93
RIMBP3Q9UFD9 HLA-H-201ENST00000383620 1096 ntBASIC27.1■■□□□ 1.93
RIMBP3Q9UFD9 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC27.1■■□□□ 1.93
RIMBP3Q9UFD9 SELENOW-201ENST00000509570 881 ntTSL 5 BASIC27.1■■□□□ 1.93
RIMBP3Q9UFD9 AC026495.1-203ENST00000557528 906 ntTSL 5 BASIC27.1■■□□□ 1.93
RIMBP3Q9UFD9 AC233724.13-201ENST00000598383 410 ntBASIC27.1■■□□□ 1.93
RIMBP3Q9UFD9 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
RIMBP3Q9UFD9 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
RIMBP3Q9UFD9 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
RIMBP3Q9UFD9 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC27.1■■□□□ 1.93
RIMBP3Q9UFD9 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC27.09■■□□□ 1.93
RIMBP3Q9UFD9 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC27.09■■□□□ 1.93
RIMBP3Q9UFD9 PP14571-201ENST00000404327 934 ntTSL 2 BASIC27.09■■□□□ 1.93
RIMBP3Q9UFD9 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC27.09■■□□□ 1.93
RIMBP3Q9UFD9 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC27.09■■□□□ 1.93
RIMBP3Q9UFD9 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC27.09■■□□□ 1.93
RIMBP3Q9UFD9 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC27.09■■□□□ 1.93
RIMBP3Q9UFD9 AC093726.1-201ENST00000608064 963 ntBASIC27.09■■□□□ 1.93
RIMBP3Q9UFD9 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC27.09■■□□□ 1.93
RIMBP3Q9UFD9 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC27.09■■□□□ 1.93
RIMBP3Q9UFD9 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC27.09■■□□□ 1.93
RIMBP3Q9UFD9 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
RIMBP3Q9UFD9 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC27.09■■□□□ 1.93
RIMBP3Q9UFD9 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC27.09■■□□□ 1.93
RIMBP3Q9UFD9 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC27.09■■□□□ 1.93
RIMBP3Q9UFD9 RPS2P36-201ENST00000456516 831 ntBASIC27.08■■□□□ 1.93
RIMBP3Q9UFD9 HNRNPUP1-201ENST00000554987 333 ntBASIC27.08■■□□□ 1.93
RIMBP3Q9UFD9 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC27.08■■□□□ 1.93
RIMBP3Q9UFD9 THAP4-206ENST00000612200 969 ntTSL 1 (best) BASIC27.08■■□□□ 1.93
RIMBP3Q9UFD9 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.93
RIMBP3Q9UFD9 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.93
RIMBP3Q9UFD9 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC27.08■■□□□ 1.93
RIMBP3Q9UFD9 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.93
RIMBP3Q9UFD9 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC27.08■■□□□ 1.93
RIMBP3Q9UFD9 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.93
RIMBP3Q9UFD9 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC27.08■■□□□ 1.93
RIMBP3Q9UFD9 AC104457.1-201ENST00000401024 814 ntBASIC27.08■■□□□ 1.93
RIMBP3Q9UFD9 KRT8P13-201ENST00000463294 1010 ntBASIC27.08■■□□□ 1.93
RIMBP3Q9UFD9 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC27.08■■□□□ 1.93
RIMBP3Q9UFD9 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC27.07■■□□□ 1.92
RIMBP3Q9UFD9 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC27.07■■□□□ 1.92
RIMBP3Q9UFD9 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC27.07■■□□□ 1.92
RIMBP3Q9UFD9 TREML1-201ENST00000373127 1194 ntAPPRIS ALT2 TSL 1 (best) BASIC27.07■■□□□ 1.92
RIMBP3Q9UFD9 USB1-202ENST00000423271 1217 ntTSL 2 BASIC27.07■■□□□ 1.92
RIMBP3Q9UFD9 GTF2H2-204ENST00000517900 659 ntTSL 5 BASIC27.07■■□□□ 1.92
RIMBP3Q9UFD9 BHMT-206ENST00000524080 1207 ntTSL 2 BASIC27.07■■□□□ 1.92
RIMBP3Q9UFD9 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC27.07■■□□□ 1.92
RIMBP3Q9UFD9 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC27.07■■□□□ 1.92
RIMBP3Q9UFD9 AC128714.1-201ENST00000637035 887 ntBASIC27.07■■□□□ 1.92
RIMBP3Q9UFD9 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC27.07■■□□□ 1.92
RIMBP3Q9UFD9 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC27.07■■□□□ 1.92
RIMBP3Q9UFD9 PRG2-202ENST00000525955 1367 ntAPPRIS P3 TSL 2 BASIC27.07■■□□□ 1.92
RIMBP3Q9UFD9 PSMC3-212ENST00000602866 1373 ntAPPRIS ALT1 TSL 1 (best) BASIC27.07■■□□□ 1.92
RIMBP3Q9UFD9 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC27.06■■□□□ 1.92
RIMBP3Q9UFD9 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC27.06■■□□□ 1.92
RIMBP3Q9UFD9 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
RIMBP3Q9UFD9 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
RIMBP3Q9UFD9 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
RIMBP3Q9UFD9 C1orf123-201ENST00000294360 1085 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
RIMBP3Q9UFD9 RUFY2-202ENST00000342616 983 ntTSL 2 BASIC27.06■■□□□ 1.92
RIMBP3Q9UFD9 FTH1-202ENST00000526640 786 ntTSL 2 BASIC27.06■■□□□ 1.92
RIMBP3Q9UFD9 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC27.06■■□□□ 1.92
RIMBP3Q9UFD9 AC010491.1-202ENST00000567048 528 ntTSL 2 BASIC27.06■■□□□ 1.92
RIMBP3Q9UFD9 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC27.06■■□□□ 1.92
RIMBP3Q9UFD9 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC27.06■■□□□ 1.92
RIMBP3Q9UFD9 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC27.06■■□□□ 1.92
RIMBP3Q9UFD9 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC27.06■■□□□ 1.92
RIMBP3Q9UFD9 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC27.06■■□□□ 1.92
RIMBP3Q9UFD9 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC27.06■■□□□ 1.92
RIMBP3Q9UFD9 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC27.06■■□□□ 1.92
RIMBP3Q9UFD9 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC27.06■■□□□ 1.92
RIMBP3Q9UFD9 LBX2-201ENST00000341396 886 ntTSL 3 BASIC27.05■■□□□ 1.92
RIMBP3Q9UFD9 TMEM243-202ENST00000423734 601 ntTSL 2 BASIC27.05■■□□□ 1.92
RIMBP3Q9UFD9 AL450003.2-201ENST00000450445 428 ntTSL 5 BASIC27.05■■□□□ 1.92
RIMBP3Q9UFD9 KRT18P34-201ENST00000488218 1270 ntBASIC27.05■■□□□ 1.92
RIMBP3Q9UFD9 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC27.05■■□□□ 1.92
RIMBP3Q9UFD9 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC27.05■■□□□ 1.92
RIMBP3Q9UFD9 SPCS2P2-201ENST00000603270 608 ntBASIC27.05■■□□□ 1.92
RIMBP3Q9UFD9 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC27.05■■□□□ 1.92
RIMBP3Q9UFD9 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC27.05■■□□□ 1.92
RIMBP3Q9UFD9 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC27.05■■□□□ 1.92
RIMBP3Q9UFD9 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC27.05■■□□□ 1.92
RIMBP3Q9UFD9 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC27.05■■□□□ 1.92
RIMBP3Q9UFD9 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC27.05■■□□□ 1.92
RIMBP3Q9UFD9 AL589987.1-201ENST00000453380 819 ntBASIC27.05■■□□□ 1.92
RIMBP3Q9UFD9 FO681548.1-201ENST00000455617 1132 ntBASIC27.05■■□□□ 1.92
RIMBP3Q9UFD9 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC27.05■■□□□ 1.92
RIMBP3Q9UFD9 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC27.05■■□□□ 1.92
Retrieved 100 of 98,524 protein–RNA pairs in 42.6 ms