Protein–RNA interactions for Protein: Q9NYA1

SPHK1, Sphingosine kinase 1, humanhuman

Predictions only

Length 384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPHK1Q9NYA1 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC16.71■□□□□ 0.27
SPHK1Q9NYA1 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SPHK1Q9NYA1 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
SPHK1Q9NYA1 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.26
SPHK1Q9NYA1 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.26
SPHK1Q9NYA1 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
SPHK1Q9NYA1 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
SPHK1Q9NYA1 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SPHK1Q9NYA1 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SPHK1Q9NYA1 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
SPHK1Q9NYA1 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC16.7■□□□□ 0.26
SPHK1Q9NYA1 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
SPHK1Q9NYA1 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SPHK1Q9NYA1 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
SPHK1Q9NYA1 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
SPHK1Q9NYA1 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
SPHK1Q9NYA1 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC16.7■□□□□ 0.26
SPHK1Q9NYA1 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
SPHK1Q9NYA1 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
SPHK1Q9NYA1 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
SPHK1Q9NYA1 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SPHK1Q9NYA1 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
SPHK1Q9NYA1 ACTG1P4-201ENST00000425123 1122 ntBASIC16.7■□□□□ 0.26
SPHK1Q9NYA1 ARTN-206ENST00000472435 402 ntTSL 3 BASIC16.7■□□□□ 0.26
SPHK1Q9NYA1 RPS29-206ENST00000557111 488 ntTSL 2 BASIC16.7■□□□□ 0.26
SPHK1Q9NYA1 AL356488.2-201ENST00000602755 427 ntBASIC16.7■□□□□ 0.26
SPHK1Q9NYA1 NME4-212ENST00000621774 904 ntTSL 3 BASIC16.7■□□□□ 0.26
SPHK1Q9NYA1 AC117500.6-201ENST00000624871 588 ntBASIC16.7■□□□□ 0.26
SPHK1Q9NYA1 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SPHK1Q9NYA1 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
SPHK1Q9NYA1 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SPHK1Q9NYA1 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SPHK1Q9NYA1 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
SPHK1Q9NYA1 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC16.7■□□□□ 0.26
SPHK1Q9NYA1 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SPHK1Q9NYA1 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
SPHK1Q9NYA1 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
SPHK1Q9NYA1 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
SPHK1Q9NYA1 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
SPHK1Q9NYA1 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
SPHK1Q9NYA1 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SPHK1Q9NYA1 AC020916.1-201ENST00000587762 1774 ntBASIC16.69■□□□□ 0.26
SPHK1Q9NYA1 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC16.69■□□□□ 0.26
SPHK1Q9NYA1 CROCCP2-202ENST00000412962 2773 ntBASIC16.69■□□□□ 0.26
SPHK1Q9NYA1 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
SPHK1Q9NYA1 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SPHK1Q9NYA1 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SPHK1Q9NYA1 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
SPHK1Q9NYA1 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
SPHK1Q9NYA1 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
SPHK1Q9NYA1 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SPHK1Q9NYA1 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
SPHK1Q9NYA1 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC16.69■□□□□ 0.26
SPHK1Q9NYA1 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SPHK1Q9NYA1 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SPHK1Q9NYA1 IGHV3-22-201ENST00000520721 359 ntBASIC16.69■□□□□ 0.26
SPHK1Q9NYA1 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC16.69■□□□□ 0.26
SPHK1Q9NYA1 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
SPHK1Q9NYA1 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC16.69■□□□□ 0.26
SPHK1Q9NYA1 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
SPHK1Q9NYA1 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC16.69■□□□□ 0.26
SPHK1Q9NYA1 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SPHK1Q9NYA1 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SPHK1Q9NYA1 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
SPHK1Q9NYA1 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
SPHK1Q9NYA1 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SPHK1Q9NYA1 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
SPHK1Q9NYA1 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC16.69■□□□□ 0.26
SPHK1Q9NYA1 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC16.69■□□□□ 0.26
SPHK1Q9NYA1 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SPHK1Q9NYA1 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SPHK1Q9NYA1 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SPHK1Q9NYA1 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
SPHK1Q9NYA1 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
SPHK1Q9NYA1 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC16.68■□□□□ 0.26
SPHK1Q9NYA1 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SPHK1Q9NYA1 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SPHK1Q9NYA1 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
SPHK1Q9NYA1 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SPHK1Q9NYA1 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC16.68■□□□□ 0.26
SPHK1Q9NYA1 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC16.68■□□□□ 0.26
SPHK1Q9NYA1 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SPHK1Q9NYA1 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SPHK1Q9NYA1 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC16.68■□□□□ 0.26
SPHK1Q9NYA1 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
SPHK1Q9NYA1 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SPHK1Q9NYA1 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
SPHK1Q9NYA1 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
SPHK1Q9NYA1 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SPHK1Q9NYA1 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
SPHK1Q9NYA1 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SPHK1Q9NYA1 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC16.68■□□□□ 0.26
SPHK1Q9NYA1 AL022342.1-201ENST00000400363 863 ntBASIC16.68■□□□□ 0.26
SPHK1Q9NYA1 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC16.68■□□□□ 0.26
SPHK1Q9NYA1 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC16.68■□□□□ 0.26
SPHK1Q9NYA1 AC136632.2-201ENST00000512891 861 ntBASIC16.68■□□□□ 0.26
SPHK1Q9NYA1 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC16.68■□□□□ 0.26
SPHK1Q9NYA1 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
SPHK1Q9NYA1 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC16.68■□□□□ 0.26
SPHK1Q9NYA1 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 49 ms