Protein–RNA interactions for Protein: Q9NXG2

THUMPD1, THUMP domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 353 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD1Q9NXG2 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
THUMPD1Q9NXG2 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
THUMPD1Q9NXG2 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
THUMPD1Q9NXG2 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
THUMPD1Q9NXG2 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
THUMPD1Q9NXG2 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC16.35■□□□□ 0.21
THUMPD1Q9NXG2 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC16.35■□□□□ 0.21
THUMPD1Q9NXG2 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC16.35■□□□□ 0.21
THUMPD1Q9NXG2 AC111152.3-201ENST00000569699 673 ntBASIC16.35■□□□□ 0.21
THUMPD1Q9NXG2 DFFB-212ENST00000625756 649 ntTSL 5 BASIC16.35■□□□□ 0.21
THUMPD1Q9NXG2 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
THUMPD1Q9NXG2 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC16.35■□□□□ 0.21
THUMPD1Q9NXG2 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
THUMPD1Q9NXG2 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
THUMPD1Q9NXG2 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
THUMPD1Q9NXG2 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
THUMPD1Q9NXG2 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
THUMPD1Q9NXG2 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC16.35■□□□□ 0.21
THUMPD1Q9NXG2 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC16.35■□□□□ 0.21
THUMPD1Q9NXG2 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
THUMPD1Q9NXG2 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
THUMPD1Q9NXG2 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
THUMPD1Q9NXG2 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
THUMPD1Q9NXG2 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
THUMPD1Q9NXG2 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
THUMPD1Q9NXG2 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC16.35■□□□□ 0.21
THUMPD1Q9NXG2 CA12-203ENST00000422263 2556 ntTSL 2 BASIC16.34■□□□□ 0.21
THUMPD1Q9NXG2 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
THUMPD1Q9NXG2 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
THUMPD1Q9NXG2 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
THUMPD1Q9NXG2 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
THUMPD1Q9NXG2 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
THUMPD1Q9NXG2 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC16.34■□□□□ 0.21
THUMPD1Q9NXG2 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
THUMPD1Q9NXG2 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC16.34■□□□□ 0.21
THUMPD1Q9NXG2 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
THUMPD1Q9NXG2 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC16.34■□□□□ 0.21
THUMPD1Q9NXG2 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
THUMPD1Q9NXG2 OS9-205ENST00000413095 1660 ntTSL 2 BASIC16.34■□□□□ 0.21
THUMPD1Q9NXG2 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
THUMPD1Q9NXG2 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
THUMPD1Q9NXG2 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
THUMPD1Q9NXG2 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
THUMPD1Q9NXG2 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
THUMPD1Q9NXG2 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
THUMPD1Q9NXG2 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
THUMPD1Q9NXG2 AC211429.1-201ENST00000415277 523 ntBASIC16.34■□□□□ 0.21
THUMPD1Q9NXG2 AL645929.1-201ENST00000420084 975 ntBASIC16.34■□□□□ 0.21
THUMPD1Q9NXG2 DAP-202ENST00000432074 1048 ntTSL 2 BASIC16.34■□□□□ 0.21
THUMPD1Q9NXG2 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC16.34■□□□□ 0.21
THUMPD1Q9NXG2 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC16.34■□□□□ 0.21
THUMPD1Q9NXG2 PPOX-219ENST00000544598 813 ntTSL 2 BASIC16.34■□□□□ 0.21
THUMPD1Q9NXG2 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
THUMPD1Q9NXG2 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC16.34■□□□□ 0.21
THUMPD1Q9NXG2 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC16.34■□□□□ 0.21
THUMPD1Q9NXG2 AL353801.3-201ENST00000609898 542 ntBASIC16.34■□□□□ 0.21
THUMPD1Q9NXG2 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
THUMPD1Q9NXG2 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
THUMPD1Q9NXG2 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
THUMPD1Q9NXG2 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
THUMPD1Q9NXG2 UBC-206ENST00000538617 1303 ntTSL 5 BASIC16.34■□□□□ 0.21
THUMPD1Q9NXG2 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
THUMPD1Q9NXG2 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
THUMPD1Q9NXG2 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
THUMPD1Q9NXG2 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
THUMPD1Q9NXG2 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC16.34■□□□□ 0.21
THUMPD1Q9NXG2 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
THUMPD1Q9NXG2 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
THUMPD1Q9NXG2 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
THUMPD1Q9NXG2 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
THUMPD1Q9NXG2 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC16.34■□□□□ 0.21
THUMPD1Q9NXG2 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC16.34■□□□□ 0.21
THUMPD1Q9NXG2 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC16.34■□□□□ 0.21
THUMPD1Q9NXG2 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC16.34■□□□□ 0.21
THUMPD1Q9NXG2 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC16.34■□□□□ 0.21
THUMPD1Q9NXG2 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
THUMPD1Q9NXG2 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
THUMPD1Q9NXG2 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.21
THUMPD1Q9NXG2 RHBDF1P1-201ENST00000427504 1941 ntBASIC16.33■□□□□ 0.21
THUMPD1Q9NXG2 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
THUMPD1Q9NXG2 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
THUMPD1Q9NXG2 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC16.33■□□□□ 0.2
THUMPD1Q9NXG2 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
THUMPD1Q9NXG2 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
THUMPD1Q9NXG2 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
THUMPD1Q9NXG2 AC007967.3-201ENST00000434308 558 ntBASIC16.33■□□□□ 0.2
THUMPD1Q9NXG2 AL671277.2-201ENST00000458060 996 ntBASIC16.33■□□□□ 0.2
THUMPD1Q9NXG2 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC16.33■□□□□ 0.2
THUMPD1Q9NXG2 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC16.33■□□□□ 0.2
THUMPD1Q9NXG2 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC16.33■□□□□ 0.2
THUMPD1Q9NXG2 AC022616.7-201ENST00000525383 220 ntBASIC16.33■□□□□ 0.2
THUMPD1Q9NXG2 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC16.33■□□□□ 0.2
THUMPD1Q9NXG2 AC083849.1-201ENST00000615227 514 ntBASIC16.33■□□□□ 0.2
THUMPD1Q9NXG2 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC16.33■□□□□ 0.2
THUMPD1Q9NXG2 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
THUMPD1Q9NXG2 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
THUMPD1Q9NXG2 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
THUMPD1Q9NXG2 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
THUMPD1Q9NXG2 AC125634.1-201ENST00000438758 1403 ntBASIC16.33■□□□□ 0.2
THUMPD1Q9NXG2 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 46 ms