Protein–RNA interactions for Protein: Q9H0L4

CSTF2T, Cleavage stimulation factor subunit 2 tau variant, humanhuman

Known RBP eCLIP

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF2TQ9H0L4 RNF44-203ENST00000504434 785 ntTSL 218.87■□□□□ 0.615e-6■■□□□ 12.3
CSTF2TQ9H0L4 SSU72-203ENST00000378725 619 ntTSL 217.32■□□□□ 0.365e-9■■□□□ 12.3
CSTF2TQ9H0L4 RNF44-207ENST00000513029 1647 ntTSL 216.37■□□□□ 0.215e-6■■□□□ 12.3
CSTF2TQ9H0L4 RNF44-202ENST00000504160 887 ntTSL 316.05■□□□□ 0.165e-6■■□□□ 12.3
CSTF2TQ9H0L4 BCAT2-205ENST00000595376 2254 ntTSL 215.94■□□□□ 0.145e-6■■□□□ 12.3
CSTF2TQ9H0L4 STARD9-204ENST00000563872 553 ntTSL 414.82□□□□□ -0.045e-6■■□□□ 12.3
CSTF2TQ9H0L4 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.075e-6■■□□□ 12.3
CSTF2TQ9H0L4 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC14.42□□□□□ -0.15e-6■■□□□ 12.3
CSTF2TQ9H0L4 RNF44-201ENST00000274811 4155 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.295e-6■■□□□ 12.3
CSTF2TQ9H0L4 WDR5-201ENST00000358625 3151 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.295e-6■■□□□ 12.3
CSTF2TQ9H0L4 MDM4-211ENST00000470908 884 ntTSL 512.34□□□□□ -0.435e-6■■□□□ 12.3
CSTF2TQ9H0L4 PPM1K-201ENST00000295908 1940 ntTSL 5 BASIC12.03□□□□□ -0.485e-6■■□□□ 12.3
CSTF2TQ9H0L4 USP24-201ENST00000294383 10549 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.515e-6■■□□□ 12.3
CSTF2TQ9H0L4 RNF44-206ENST00000509404 372 ntTSL 211.77□□□□□ -0.535e-6■■□□□ 12.3
CSTF2TQ9H0L4 C18orf25-202ENST00000588730 586 ntTSL 511.53□□□□□ -0.565e-6■■□□□ 12.3
CSTF2TQ9H0L4 PPM1K-209ENST00000514204 2962 ntTSL 1 (best) BASIC10.74□□□□□ -0.695e-6■■□□□ 12.3
CSTF2TQ9H0L4 MDM4-210ENST00000470797 909 ntTSL 210.59□□□□□ -0.715e-6■■□□□ 12.3
CSTF2TQ9H0L4 SSU72-202ENST00000359060 4176 ntTSL 2 BASIC10.16□□□□□ -0.785e-6■■□□□ 12.3
CSTF2TQ9H0L4 PPM1K-210ENST00000608933 6484 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.825e-6■■□□□ 12.3
CSTF2TQ9H0L4 MDM4-209ENST00000463049 6102 ntTSL 59.88□□□□□ -0.835e-6■■□□□ 12.3
CSTF2TQ9H0L4 PPM1K-203ENST00000506423 1091 ntTSL 1 (best)9.43□□□□□ -0.95e-6■■□□□ 12.3
CSTF2TQ9H0L4 STARD9-205ENST00000564158 6049 ntTSL 1 (best)9.4□□□□□ -0.95e-6■■□□□ 12.3
CSTF2TQ9H0L4 SLC7A6-202ENST00000379152 5074 ntTSL 1 (best)8.88□□□□□ -0.993e-8■■□□□ 12.3
CSTF2TQ9H0L4 SLC7A6-201ENST00000219343 6251 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.993e-8■■□□□ 12.3
CSTF2TQ9H0L4 SLC7A6-211ENST00000566834 573 ntTSL 58.09□□□□□ -1.113e-8■■□□□ 12.3
CSTF2TQ9H0L4 PPM1K-204ENST00000508256 923 ntTSL 2 BASIC7.84□□□□□ -1.155e-6■■□□□ 12.3
CSTF2TQ9H0L4 MDM4-214ENST00000612738 9407 ntTSL 5 BASIC7.83□□□□□ -1.165e-6■■□□□ 12.3
CSTF2TQ9H0L4 MDM4-212ENST00000471783 552 ntTSL 37.79□□□□□ -1.165e-6■■□□□ 12.3
CSTF2TQ9H0L4 AC091987.1-202ENST00000522464 789 ntTSL 3 BASIC7.67□□□□□ -1.185e-6■■□□□ 12.3
CSTF2TQ9H0L4 SLC7A6-209ENST00000566454 6308 ntAPPRIS P1 TSL 5 BASIC7.39□□□□□ -1.233e-8■■□□□ 12.3
CSTF2TQ9H0L4 MDM4-205ENST00000391947 10008 ntTSL 1 (best) BASIC7.28□□□□□ -1.245e-6■■□□□ 12.3
CSTF2TQ9H0L4 PPM1K-206ENST00000510548 572 ntTSL 47.14□□□□□ -1.275e-6■■□□□ 12.3
CSTF2TQ9H0L4 MDM4-207ENST00000454264 9926 ntTSL 1 (best) BASIC7.1□□□□□ -1.275e-6■■□□□ 12.3
CSTF2TQ9H0L4 SLC7A6-216ENST00000618043 6124 ntTSL 5 BASIC7.09□□□□□ -1.273e-8■■□□□ 12.3
CSTF2TQ9H0L4 MDM4-204ENST00000367183 9098 ntTSL 1 (best) BASIC7.03□□□□□ -1.285e-6■■□□□ 12.3
CSTF2TQ9H0L4 MDM4-215ENST00000614459 9782 ntTSL 5 BASIC6.98□□□□□ -1.295e-6■■□□□ 12.3
CSTF2TQ9H0L4 MDM4-203ENST00000367182 10073 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.345e-6■■□□□ 12.3
CSTF2TQ9H0L4 MDM4-216ENST00000616250 9597 ntTSL 5 BASIC6.42□□□□□ -1.385e-6■■□□□ 12.3
CSTF2TQ9H0L4 PPP2R5C-225ENST00000557071 798 ntTSL 35.98□□□□□ -1.455e-6■■□□□ 12.3
CSTF2TQ9H0L4 MDM4-217ENST00000621032 5592 ntTSL 2 BASIC5.93□□□□□ -1.465e-6■■□□□ 12.3
CSTF2TQ9H0L4 PPP2R5C-214ENST00000555237 607 ntTSL 55.57□□□□□ -1.525e-6■■□□□ 12.3
CSTF2TQ9H0L4 STARD9-201ENST00000290607 15567 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.575e-6■■□□□ 12.3
CSTF2TQ9H0L4 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC5.23□□□□□ -1.575e-6■■□□□ 12.3
CSTF2TQ9H0L4 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC20.93■□□□□ 0.941e-13■■□□□ 12.3
CSTF2TQ9H0L4 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.791e-13■■□□□ 12.3
CSTF2TQ9H0L4 C22orf39-204ENST00000509549 2979 ntTSL 211.03□□□□□ -0.641e-13■■□□□ 12.3
CSTF2TQ9H0L4 HIRA-203ENST00000452818 453 ntTSL 510.57□□□□□ -0.721e-13■■□□□ 12.3
CSTF2TQ9H0L4 SPHK1-208ENST00000591651 541 ntTSL 419.45■□□□□ 0.75e-9■■□□□ 12.3
CSTF2TQ9H0L4 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC18.3■□□□□ 0.525e-9■■□□□ 12.3
CSTF2TQ9H0L4 SPHK1-205ENST00000588682 858 ntTSL 317.74■□□□□ 0.435e-9■■□□□ 12.3
CSTF2TQ9H0L4 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.673e-6■■□□□ 12.3
CSTF2TQ9H0L4 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.551e-6■■□□□ 12.3
CSTF2TQ9H0L4 TRIP6-206ENST00000476870 1750 ntTSL 217.03■□□□□ 0.323e-6■■□□□ 12.3
CSTF2TQ9H0L4 TRIP6-202ENST00000417475 992 ntTSL 1 (best)16.79■□□□□ 0.283e-6■■□□□ 12.3
CSTF2TQ9H0L4 TRIP6-205ENST00000463125 835 ntTSL 215.84■□□□□ 0.133e-6■■□□□ 12.3
CSTF2TQ9H0L4 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC15.41■□□□□ 0.063e-6■■□□□ 12.3
CSTF2TQ9H0L4 TRIP6-204ENST00000437505 875 ntTSL 315.23■□□□□ 0.033e-6■■□□□ 12.3
CSTF2TQ9H0L4 TRIP6-203ENST00000429658 646 ntTSL 314.61□□□□□ -0.073e-6■■□□□ 12.3
CSTF2TQ9H0L4 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.435e-7■■□□□ 12.3
CSTF2TQ9H0L4 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.325e-7■■□□□ 12.3
CSTF2TQ9H0L4 KMT5A-204ENST00000437519 1774 ntTSL 211.39□□□□□ -0.595e-7■■□□□ 12.3
CSTF2TQ9H0L4 YES1-205ENST00000584307 4639 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.973e-7■■□□□ 12.3
CSTF2TQ9H0L4 YES1-201ENST00000314574 4441 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.313e-7■■□□□ 12.3
CSTF2TQ9H0L4 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.081e-6■■□□□ 12.3
CSTF2TQ9H0L4 DGCR8-204ENST00000457069 770 ntTSL 316.82■□□□□ 0.281e-6■■□□□ 12.3
CSTF2TQ9H0L4 SYNJ2-208ENST00000640338 3959 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.421e-6■■□□□ 12.3
CSTF2TQ9H0L4 SYNJ2-201ENST00000355585 7378 ntAPPRIS P2 TSL 1 (best) BASIC10.93□□□□□ -0.661e-6■■□□□ 12.3
CSTF2TQ9H0L4 RASSF3-204ENST00000542104 3492 ntTSL 1 (best) BASIC13.01□□□□□ -0.334e-12■■□□□ 12.3
CSTF2TQ9H0L4 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC17.08■□□□□ 0.322e-7■■□□□ 12.3
CSTF2TQ9H0L4 EFCAB2-202ENST00000366522 6167 ntTSL 2 BASIC14.29□□□□□ -0.122e-7■■□□□ 12.3
CSTF2TQ9H0L4 EFCAB2-201ENST00000366521 860 ntTSL 211.41□□□□□ -0.582e-7■■□□□ 12.3
CSTF2TQ9H0L4 EFCAB2-213ENST00000497591 1201 ntTSL 511.17□□□□□ -0.622e-7■■□□□ 12.3
CSTF2TQ9H0L4 EFCAB2-208ENST00000473686 906 ntTSL 510.09□□□□□ -0.792e-7■■□□□ 12.3
CSTF2TQ9H0L4 EFCAB2-211ENST00000487845 1389 ntTSL 28.66□□□□□ -1.022e-7■■□□□ 12.3
CSTF2TQ9H0L4 EFCAB2-207ENST00000447569 527 ntTSL 2 BASIC8.39□□□□□ -1.072e-7■■□□□ 12.3
CSTF2TQ9H0L4 EFCAB2-212ENST00000495271 744 ntTSL 57.74□□□□□ -1.172e-7■■□□□ 12.3
CSTF2TQ9H0L4 EFCAB2-204ENST00000391837 738 ntTSL 57.06□□□□□ -1.282e-7■■□□□ 12.3
CSTF2TQ9H0L4 EFCAB2-215ENST00000549220 557 ntTSL 46.2□□□□□ -1.422e-7■■□□□ 12.3
CSTF2TQ9H0L4 JADE2-210ENST00000515554 549 ntTSL 424.07■■□□□ 1.442e-6■■□□□ 12.3
CSTF2TQ9H0L4 JADE2-206ENST00000431355 887 ntTSL 320.79■□□□□ 0.922e-6■■□□□ 12.3
CSTF2TQ9H0L4 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC18.64■□□□□ 0.572e-6■■□□□ 12.3
CSTF2TQ9H0L4 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.162e-6■■□□□ 12.3
CSTF2TQ9H0L4 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC14.78□□□□□ -0.042e-6■■□□□ 12.3
CSTF2TQ9H0L4 JADE2-203ENST00000395003 6465 ntTSL 1 (best) BASIC14.07□□□□□ -0.162e-6■■□□□ 12.3
CSTF2TQ9H0L4 JADE2-209ENST00000512386 567 ntTSL 413.88□□□□□ -0.192e-6■■□□□ 12.3
CSTF2TQ9H0L4 CCND1-204ENST00000539241 920 ntTSL 213.24□□□□□ -0.291e-7■■□□□ 12.3
CSTF2TQ9H0L4 CCND1-202ENST00000535993 568 ntTSL 211.55□□□□□ -0.561e-7■■□□□ 12.3
CSTF2TQ9H0L4 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.249e-7■■□□□ 12.3
CSTF2TQ9H0L4 ZNF146-202ENST00000456324 3780 ntAPPRIS P1 TSL 2 BASIC9.15□□□□□ -0.947e-12■■□□□ 12.2
CSTF2TQ9H0L4 ZNF146-203ENST00000586094 565 ntTSL 27.33□□□□□ -1.247e-12■■□□□ 12.2
CSTF2TQ9H0L4 ZNF146-201ENST00000443387 3326 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.537e-12■■□□□ 12.2
CSTF2TQ9H0L4 ZNF146-205ENST00000591063 533 ntTSL 24.99□□□□□ -1.617e-12■■□□□ 12.2
CSTF2TQ9H0L4 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC19.38■□□□□ 0.694e-7■■□□□ 12.2
CSTF2TQ9H0L4 AXIN2-204ENST00000577278 976 ntTSL 516.15■□□□□ 0.182e-10■■□□□ 12.2
CSTF2TQ9H0L4 LZTR1-202ENST00000414985 872 ntTSL 520.78■□□□□ 0.928e-7■■□□□ 12.2
CSTF2TQ9H0L4 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -08e-7■■□□□ 12.2
CSTF2TQ9H0L4 LZTR1-212ENST00000480895 539 ntTSL 413.2□□□□□ -0.38e-7■■□□□ 12.2
CSTF2TQ9H0L4 CNOT3-201ENST00000221232 2852 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.299e-10■■□□□ 12.2
CSTF2TQ9H0L4 CNOT3-210ENST00000618939 4516 ntTSL 512.92□□□□□ -0.349e-10■■□□□ 12.2
CSTF2TQ9H0L4 NCOA5-202ENST00000372291 727 ntTSL 323.16■■□□□ 1.31e-8■■□□□ 12.2
Retrieved 100 of 19,151 protein–RNA pairs in 119.6 ms