RNA–Protein interactions for RNA: ENST00000470797.5

MDM4-210, Transcript of MDM4, p53 regulator, humanhuman

TSL 2

Gene MDM4, Length 909 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM4-210ENST00000470797 AEBP2Q6ZN18 517 aaPredicted RBP32.49■■■□□ 2.79
MDM4-210ENST00000470797 CHIC1Q5VXU3 224 aa30.77■■■□□ 2.52
MDM4-210ENST00000470797 SENP3Q9H4L4 574 aaPredicted RBP27.82■■■□□ 2.04
MDM4-210ENST00000470797 PHF23Q9BUL5 403 aaPredicted RBP27.4■■□□□ 1.98
MDM4-210ENST00000470797 FOXD1Q16676 465 aa25.9■■□□□ 1.74
MDM4-210ENST00000470797 NISCHQ9Y2I1 1504 aa25.1■■□□□ 1.61
MDM4-210ENST00000470797 PLPPR3Q6T4P5 718 aa24.56■■□□□ 1.52
MDM4-210ENST00000470797 MSH5O43196 834 aa24.35■■□□□ 1.49
MDM4-210ENST00000470797 PIAS4Q8N2W9 510 aaPredicted RBP24.22■■□□□ 1.47
MDM4-210ENST00000470797 PPP6R1Q9UPN7 881 aa24.07■■□□□ 1.44
MDM4-210ENST00000470797 ADRA2BP18089 450 aa24.01■■□□□ 1.43
MDM4-210ENST00000470797 POTEDQ86YR6 584 aa23.95■■□□□ 1.42
MDM4-210ENST00000470797 MAPK8IP2Q13387 824 aaPredicted RBP22.08■■□□□ 1.13
MDM4-210ENST00000470797 SCAF1Q9H7N4 1312 aaKnown RBP22.06■■□□□ 1.12
MDM4-210ENST00000470797 DMRT2Q9Y5R5 561 aa22.01■■□□□ 1.11
MDM4-210ENST00000470797 CCDC180Q9P1Z9 1646 aa21.76■■□□□ 1.07
MDM4-210ENST00000470797 PPP4R3CPQ6ZMV5 832 aa21.48■■□□□ 1.03
MDM4-210ENST00000470797 DCAF8L1A6NGE4 600 aa21.17■□□□□ 0.98
MDM4-210ENST00000470797 ZCCHC6Q5VYS8 1495 aaKnown RBP21.15■□□□□ 0.98
MDM4-210ENST00000470797 HOXD11P31277 338 aaPredicted RBP21.14■□□□□ 0.97
MDM4-210ENST00000470797 CNKSR2Q8WXI2 1034 aa21.13■□□□□ 0.97
MDM4-210ENST00000470797 CACNB1Q02641 598 aaPredicted RBP20.97■□□□□ 0.95
MDM4-210ENST00000470797 RNF216Q9NWF9 866 aaPredicted RBP20.96■□□□□ 0.95
MDM4-210ENST00000470797 DCAF1Q9Y4B6 1507 aa20.8■□□□□ 0.92
MDM4-210ENST00000470797 SHROOM4Q9ULL8 1493 aa20.74■□□□□ 0.91
MDM4-210ENST00000470797 RNF39Q9H2S5 420 aa20.72■□□□□ 0.91
MDM4-210ENST00000470797 NCBP3Q53F19 620 aaKnown RBP20.66■□□□□ 0.9
MDM4-210ENST00000470797 DCAF8L2P0C7V8 631 aa20.63■□□□□ 0.89
MDM4-210ENST00000470797 DNAJC5BQ9UF47 199 aa20.45■□□□□ 0.86
MDM4-210ENST00000470797 C1QBPQ07021 282 aaKnown RBP20.44■□□□□ 0.86
MDM4-210ENST00000470797 MYO15BQ96JP2 1530 aa20.43■□□□□ 0.86
MDM4-210ENST00000470797 NPM3O75607 178 aaKnown RBP20.31■□□□□ 0.84
MDM4-210ENST00000470797 SUPT5HO00267 1087 aaKnown RBP20.23■□□□□ 0.83
MDM4-210ENST00000470797 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.19■□□□□ 0.822e-7■■■■□ 22.8
MDM4-210ENST00000470797 NACADO15069 1562 aa20.14■□□□□ 0.81
MDM4-210ENST00000470797 ABCC9O60706 1549 aa20.08■□□□□ 0.81
MDM4-210ENST00000470797 SCRIBQ14160 1630 aa19.96■□□□□ 0.79
MDM4-210ENST00000470797 RB1CC1Q8TDY2 1594 aa19.87■□□□□ 0.77
MDM4-210ENST00000470797 KCNA4P22459 653 aa19.8■□□□□ 0.76
MDM4-210ENST00000470797 U3KPZ7 1027 aaPredicted RBP19.71■□□□□ 0.75
MDM4-210ENST00000470797 RSF1Q96T23 1441 aaPredicted RBP19.63■□□□□ 0.73
MDM4-210ENST00000470797 CAPN15O75808 1086 aa19.49■□□□□ 0.71
MDM4-210ENST00000470797 SPINK5Q9NQ38 1064 aaPredicted RBP19.46■□□□□ 0.71
MDM4-210ENST00000470797 SLC4A2P04920 1241 aa19.41■□□□□ 0.7
MDM4-210ENST00000470797 CECR2Q9BXF3 1484 aa19.4■□□□□ 0.7
MDM4-210ENST00000470797 UNC13AQ9UPW8 1703 aa19.38■□□□□ 0.69
MDM4-210ENST00000470797 BAZ1AQ9NRL2 1556 aaPredicted RBP19.37■□□□□ 0.69
MDM4-210ENST00000470797 DSG3P32926 999 aa19.36■□□□□ 0.69
MDM4-210ENST00000470797 MROH2BQ7Z745 1585 aa19.36■□□□□ 0.69
MDM4-210ENST00000470797 APLP2Q06481 763 aa19.24■□□□□ 0.67
MDM4-210ENST00000470797 WIZO95785 1651 aa19.21■□□□□ 0.67
MDM4-210ENST00000470797 SMARCA4P51532 1647 aa19.18■□□□□ 0.66
MDM4-210ENST00000470797 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.17■□□□□ 0.66
MDM4-210ENST00000470797 HNRNPUL2Q1KMD3 747 aaKnown RBP19.17■□□□□ 0.66
MDM4-210ENST00000470797 BICRAQ9NZM4 1560 aa19.16■□□□□ 0.66
MDM4-210ENST00000470797 TRHP20396 242 aaPredicted RBP19.14■□□□□ 0.65
MDM4-210ENST00000470797 ZNF219Q9P2Y4 722 aaPredicted RBP19.12■□□□□ 0.65
MDM4-210ENST00000470797 TOP2AP11388 1531 aaKnown RBP19.1■□□□□ 0.65
MDM4-210ENST00000470797 TRIM41Q8WV44 630 aa19.05■□□□□ 0.64
MDM4-210ENST00000470797 SAMD1Q6SPF0 538 aaPredicted RBP19.04■□□□□ 0.64
MDM4-210ENST00000470797 PABPN1Q86U42 306 aaKnown RBP eCLIP19.04■□□□□ 0.64
MDM4-210ENST00000470797 ABCB7O75027 752 aa19■□□□□ 0.63
MDM4-210ENST00000470797 PEG3Q9GZU2 1588 aa18.95■□□□□ 0.62
MDM4-210ENST00000470797 CCDC88BA6NC98 1476 aa18.89■□□□□ 0.61
MDM4-210ENST00000470797 SMARCA2P51531 1590 aa18.89■□□□□ 0.61
MDM4-210ENST00000470797 EIF4G1Q04637 1599 aaKnown RBP18.86■□□□□ 0.61
MDM4-210ENST00000470797 MYCNP04198 464 aaPredicted RBP18.84■□□□□ 0.61
MDM4-210ENST00000470797 LOC105371045A0A1W2PR82 267 aa18.82■□□□□ 0.6
MDM4-210ENST00000470797 ATAD2BQ9ULI0 1458 aa18.78■□□□□ 0.6
MDM4-210ENST00000470797 POTEHQ6S545 545 aa18.77■□□□□ 0.6
MDM4-210ENST00000470797 BAZ1BQ9UIG0 1483 aaKnown RBP18.72■□□□□ 0.59
MDM4-210ENST00000470797 SLC4A1APQ9BWU0 796 aaKnown RBP18.69■□□□□ 0.58
MDM4-210ENST00000470797 FAM9AQ8IZU1 332 aaPredicted RBP18.64■□□□□ 0.57
MDM4-210ENST00000470797 HMGXB3Q12766 1538 aa18.6■□□□□ 0.57
MDM4-210ENST00000470797 ABCC8Q09428 1581 aa18.57■□□□□ 0.56
MDM4-210ENST00000470797 NCAPD3P42695 1498 aa18.57■□□□□ 0.56
MDM4-210ENST00000470797 EEA1Q15075 1411 aa18.57■□□□□ 0.56
MDM4-210ENST00000470797 POLA2Q14181 598 aa18.56■□□□□ 0.56
MDM4-210ENST00000470797 RBM42Q9BTD8 480 aaKnown RBP18.55■□□□□ 0.56
MDM4-210ENST00000470797 FOXD4L1Q9NU39 408 aa18.55■□□□□ 0.56
MDM4-210ENST00000470797 WRNQ14191 1432 aaPredicted RBP eCLIP18.5■□□□□ 0.55
MDM4-210ENST00000470797 PCGF6Q9BYE7 350 aa18.48■□□□□ 0.55
MDM4-210ENST00000470797 TRIM26Q12899 539 aaPredicted RBP18.45■□□□□ 0.54
MDM4-210ENST00000470797 CSRNP3Q8WYN3 585 aa18.37■□□□□ 0.53
MDM4-210ENST00000470797 SOGA1O94964 1423 aa18.35■□□□□ 0.53
MDM4-210ENST00000470797 HRCP23327 699 aa18.35■□□□□ 0.53
MDM4-210ENST00000470797 ATF5Q9Y2D1 282 aaPredicted RBP18.34■□□□□ 0.53
MDM4-210ENST00000470797 SYNJ1O43426 1573 aa18.32■□□□□ 0.52
MDM4-210ENST00000470797 EHMT2Q96KQ7 1210 aa18.31■□□□□ 0.52
MDM4-210ENST00000470797 TNIKQ9UKE5 1360 aa18.3■□□□□ 0.52
MDM4-210ENST00000470797 TOP2BQ02880 1626 aa18.27■□□□□ 0.51
MDM4-210ENST00000470797 CFTRP13569 1480 aa18.26■□□□□ 0.51
MDM4-210ENST00000470797 GOLGA3Q08378 1498 aa18.26■□□□□ 0.51
MDM4-210ENST00000470797 BIVM-ERCC5R4GMW8 1640 aa18.23■□□□□ 0.51
MDM4-210ENST00000470797 CEP164Q9UPV0 1460 aa18.23■□□□□ 0.51
MDM4-210ENST00000470797 ZBTB12Q9Y330 459 aaPredicted RBP18.23■□□□□ 0.51
MDM4-210ENST00000470797 PRDM2Q13029 1718 aa18.23■□□□□ 0.51
MDM4-210ENST00000470797 RUSC2Q8N2Y8 1516 aa18.21■□□□□ 0.51
MDM4-210ENST00000470797 KIF21BO75037 1637 aa18.2■□□□□ 0.5
MDM4-210ENST00000470797 CC2D2AQ9P2K1 1620 aa18.2■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms