Protein–RNA interactions for Protein: Q9BU61

NDUFAF3, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3, humanhuman

Predictions only

Length 184 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFAF3Q9BU61 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
NDUFAF3Q9BU61 KRT8P45-201ENST00000414328 1447 ntBASIC13.48□□□□□ -0.25
NDUFAF3Q9BU61 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
NDUFAF3Q9BU61 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC13.48□□□□□ -0.25
NDUFAF3Q9BU61 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
NDUFAF3Q9BU61 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
NDUFAF3Q9BU61 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
NDUFAF3Q9BU61 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC13.48□□□□□ -0.25
NDUFAF3Q9BU61 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
NDUFAF3Q9BU61 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
NDUFAF3Q9BU61 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
NDUFAF3Q9BU61 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC13.48□□□□□ -0.25
NDUFAF3Q9BU61 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC13.48□□□□□ -0.25
NDUFAF3Q9BU61 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
NDUFAF3Q9BU61 ARMC10P1-201ENST00000313754 855 ntBASIC13.48□□□□□ -0.25
NDUFAF3Q9BU61 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
NDUFAF3Q9BU61 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
NDUFAF3Q9BU61 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC13.48□□□□□ -0.25
NDUFAF3Q9BU61 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC13.48□□□□□ -0.25
NDUFAF3Q9BU61 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
NDUFAF3Q9BU61 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
NDUFAF3Q9BU61 ECEL1P2-202ENST00000465689 757 ntBASIC13.48□□□□□ -0.25
NDUFAF3Q9BU61 AC091390.4-202ENST00000476426 537 ntBASIC13.48□□□□□ -0.25
NDUFAF3Q9BU61 KRT18P41-201ENST00000518924 1277 ntBASIC13.48□□□□□ -0.25
NDUFAF3Q9BU61 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
NDUFAF3Q9BU61 CKBP1-201ENST00000565489 1086 ntBASIC13.48□□□□□ -0.25
NDUFAF3Q9BU61 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
NDUFAF3Q9BU61 AC093010.1-201ENST00000473625 1624 ntBASIC13.48□□□□□ -0.25
NDUFAF3Q9BU61 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC13.48□□□□□ -0.25
NDUFAF3Q9BU61 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC13.48□□□□□ -0.25
NDUFAF3Q9BU61 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
NDUFAF3Q9BU61 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
NDUFAF3Q9BU61 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
NDUFAF3Q9BU61 PAUPAR-201ENST00000630360 2965 ntBASIC13.48□□□□□ -0.25
NDUFAF3Q9BU61 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC13.48□□□□□ -0.25
NDUFAF3Q9BU61 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC13.48□□□□□ -0.25
NDUFAF3Q9BU61 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
NDUFAF3Q9BU61 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
NDUFAF3Q9BU61 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC13.48□□□□□ -0.25
NDUFAF3Q9BU61 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC13.48□□□□□ -0.25
NDUFAF3Q9BU61 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
NDUFAF3Q9BU61 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
NDUFAF3Q9BU61 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
NDUFAF3Q9BU61 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC13.48□□□□□ -0.25
NDUFAF3Q9BU61 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
NDUFAF3Q9BU61 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC13.48□□□□□ -0.25
NDUFAF3Q9BU61 MBP-202ENST00000355994 2772 ntTSL 5 BASIC13.48□□□□□ -0.25
NDUFAF3Q9BU61 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC13.48□□□□□ -0.25
NDUFAF3Q9BU61 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC13.48□□□□□ -0.25
NDUFAF3Q9BU61 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC13.48□□□□□ -0.25
NDUFAF3Q9BU61 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC13.48□□□□□ -0.25
NDUFAF3Q9BU61 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
NDUFAF3Q9BU61 AC144831.1-201ENST00000573312 2656 ntBASIC13.47□□□□□ -0.25
NDUFAF3Q9BU61 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC13.47□□□□□ -0.25
NDUFAF3Q9BU61 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
NDUFAF3Q9BU61 AC063926.3-201ENST00000624734 5658 ntBASIC13.47□□□□□ -0.25
NDUFAF3Q9BU61 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC13.47□□□□□ -0.25
NDUFAF3Q9BU61 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
NDUFAF3Q9BU61 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
NDUFAF3Q9BU61 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
NDUFAF3Q9BU61 AL009178.2-201ENST00000597278 2719 ntBASIC13.47□□□□□ -0.25
NDUFAF3Q9BU61 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC13.47□□□□□ -0.25
NDUFAF3Q9BU61 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC13.47□□□□□ -0.25
NDUFAF3Q9BU61 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC13.47□□□□□ -0.25
NDUFAF3Q9BU61 BANP-203ENST00000393207 2438 ntTSL 2 BASIC13.47□□□□□ -0.25
NDUFAF3Q9BU61 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
NDUFAF3Q9BU61 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
NDUFAF3Q9BU61 SNCG-201ENST00000348795 684 ntTSL 2 BASIC13.47□□□□□ -0.25
NDUFAF3Q9BU61 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC13.47□□□□□ -0.25
NDUFAF3Q9BU61 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
NDUFAF3Q9BU61 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
NDUFAF3Q9BU61 HMGA1P5-201ENST00000412453 271 ntBASIC13.47□□□□□ -0.25
NDUFAF3Q9BU61 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC13.47□□□□□ -0.25
NDUFAF3Q9BU61 FDX2-206ENST00000492239 773 ntTSL 2 BASIC13.47□□□□□ -0.25
NDUFAF3Q9BU61 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC13.47□□□□□ -0.25
NDUFAF3Q9BU61 AL512604.3-201ENST00000569583 964 ntBASIC13.47□□□□□ -0.25
NDUFAF3Q9BU61 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC13.47□□□□□ -0.25
NDUFAF3Q9BU61 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
NDUFAF3Q9BU61 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC13.47□□□□□ -0.25
NDUFAF3Q9BU61 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC13.47□□□□□ -0.25
NDUFAF3Q9BU61 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
NDUFAF3Q9BU61 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
NDUFAF3Q9BU61 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC13.47□□□□□ -0.25
NDUFAF3Q9BU61 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
NDUFAF3Q9BU61 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
NDUFAF3Q9BU61 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC13.47□□□□□ -0.25
NDUFAF3Q9BU61 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
NDUFAF3Q9BU61 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
NDUFAF3Q9BU61 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC13.47□□□□□ -0.25
NDUFAF3Q9BU61 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
NDUFAF3Q9BU61 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
NDUFAF3Q9BU61 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC13.47□□□□□ -0.25
NDUFAF3Q9BU61 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
NDUFAF3Q9BU61 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
NDUFAF3Q9BU61 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
NDUFAF3Q9BU61 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
NDUFAF3Q9BU61 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC13.47□□□□□ -0.25
NDUFAF3Q9BU61 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC13.47□□□□□ -0.25
NDUFAF3Q9BU61 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
NDUFAF3Q9BU61 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms