Protein–RNA interactions for Protein: Q9BU40

CHRDL1, Chordin-like protein 1, humanhuman

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRDL1Q9BU40 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
CHRDL1Q9BU40 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC13.85□□□□□ -0.19
CHRDL1Q9BU40 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CHRDL1Q9BU40 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
CHRDL1Q9BU40 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC13.85□□□□□ -0.19
CHRDL1Q9BU40 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
CHRDL1Q9BU40 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC13.85□□□□□ -0.19
CHRDL1Q9BU40 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC13.85□□□□□ -0.19
CHRDL1Q9BU40 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
CHRDL1Q9BU40 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
CHRDL1Q9BU40 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
CHRDL1Q9BU40 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
CHRDL1Q9BU40 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC13.84□□□□□ -0.19
CHRDL1Q9BU40 AC126755.1-201ENST00000525846 6405 ntBASIC13.84□□□□□ -0.19
CHRDL1Q9BU40 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CHRDL1Q9BU40 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
CHRDL1Q9BU40 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
CHRDL1Q9BU40 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC13.84□□□□□ -0.19
CHRDL1Q9BU40 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CHRDL1Q9BU40 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CHRDL1Q9BU40 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
CHRDL1Q9BU40 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
CHRDL1Q9BU40 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC13.84□□□□□ -0.19
CHRDL1Q9BU40 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
CHRDL1Q9BU40 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
CHRDL1Q9BU40 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
CHRDL1Q9BU40 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CHRDL1Q9BU40 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CHRDL1Q9BU40 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
CHRDL1Q9BU40 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC13.84□□□□□ -0.19
CHRDL1Q9BU40 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
CHRDL1Q9BU40 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC13.84□□□□□ -0.19
CHRDL1Q9BU40 LTBR-211ENST00000543190 785 ntTSL 3 BASIC13.84□□□□□ -0.19
CHRDL1Q9BU40 LINC01238-205ENST00000567549 1107 ntBASIC13.84□□□□□ -0.19
CHRDL1Q9BU40 RNF126P1-202ENST00000569893 925 ntBASIC13.84□□□□□ -0.19
CHRDL1Q9BU40 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC13.84□□□□□ -0.19
CHRDL1Q9BU40 GXYLT1P4-201ENST00000613576 1192 ntBASIC13.84□□□□□ -0.19
CHRDL1Q9BU40 AC116407.2-201ENST00000613639 860 ntBASIC13.84□□□□□ -0.19
CHRDL1Q9BU40 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC13.84□□□□□ -0.19
CHRDL1Q9BU40 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC13.84□□□□□ -0.19
CHRDL1Q9BU40 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC13.84□□□□□ -0.19
CHRDL1Q9BU40 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC13.84□□□□□ -0.19
CHRDL1Q9BU40 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC13.84□□□□□ -0.19
CHRDL1Q9BU40 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
CHRDL1Q9BU40 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
CHRDL1Q9BU40 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
CHRDL1Q9BU40 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
CHRDL1Q9BU40 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC13.84□□□□□ -0.19
CHRDL1Q9BU40 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
CHRDL1Q9BU40 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CHRDL1Q9BU40 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
CHRDL1Q9BU40 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.19
CHRDL1Q9BU40 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
CHRDL1Q9BU40 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.19
CHRDL1Q9BU40 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
CHRDL1Q9BU40 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.19
CHRDL1Q9BU40 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
CHRDL1Q9BU40 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC13.83□□□□□ -0.19
CHRDL1Q9BU40 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
CHRDL1Q9BU40 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
CHRDL1Q9BU40 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.19
CHRDL1Q9BU40 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.19
CHRDL1Q9BU40 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC13.83□□□□□ -0.2
CHRDL1Q9BU40 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
CHRDL1Q9BU40 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC13.83□□□□□ -0.2
CHRDL1Q9BU40 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
CHRDL1Q9BU40 Z83836.1-201ENST00000624605 1642 ntBASIC13.83□□□□□ -0.2
CHRDL1Q9BU40 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CHRDL1Q9BU40 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
CHRDL1Q9BU40 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
CHRDL1Q9BU40 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CHRDL1Q9BU40 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CHRDL1Q9BU40 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CHRDL1Q9BU40 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CHRDL1Q9BU40 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC13.83□□□□□ -0.2
CHRDL1Q9BU40 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
CHRDL1Q9BU40 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
CHRDL1Q9BU40 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
CHRDL1Q9BU40 GUK1-204ENST00000366721 689 ntTSL 3 BASIC13.83□□□□□ -0.2
CHRDL1Q9BU40 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CHRDL1Q9BU40 DDT-203ENST00000403754 569 ntTSL 3 BASIC13.83□□□□□ -0.2
CHRDL1Q9BU40 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC13.83□□□□□ -0.2
CHRDL1Q9BU40 DDT-206ENST00000430101 573 ntTSL 2 BASIC13.83□□□□□ -0.2
CHRDL1Q9BU40 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC13.83□□□□□ -0.2
CHRDL1Q9BU40 AL390719.2-201ENST00000606993 987 ntBASIC13.83□□□□□ -0.2
CHRDL1Q9BU40 BANP-227ENST00000626016 2144 ntTSL 2 BASIC13.83□□□□□ -0.2
CHRDL1Q9BU40 WDR6-223ENST00000627177 207 ntTSL 2 BASIC13.83□□□□□ -0.2
CHRDL1Q9BU40 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
CHRDL1Q9BU40 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CHRDL1Q9BU40 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC13.83□□□□□ -0.2
CHRDL1Q9BU40 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
CHRDL1Q9BU40 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC13.83□□□□□ -0.2
CHRDL1Q9BU40 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
CHRDL1Q9BU40 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC13.83□□□□□ -0.2
CHRDL1Q9BU40 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC13.83□□□□□ -0.2
CHRDL1Q9BU40 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
CHRDL1Q9BU40 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC13.83□□□□□ -0.2
CHRDL1Q9BU40 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
CHRDL1Q9BU40 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC13.83□□□□□ -0.2
CHRDL1Q9BU40 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 39.7 ms