Protein–RNA interactions for Protein: Q9BRZ2

TRIM56, E3 ubiquitin-protein ligase TRIM56, humanhuman

Known RBP Predictions only

Length 755 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56Q9BRZ2 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
TRIM56Q9BRZ2 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC17.73■□□□□ 0.43
TRIM56Q9BRZ2 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC17.73■□□□□ 0.43
TRIM56Q9BRZ2 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
TRIM56Q9BRZ2 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
TRIM56Q9BRZ2 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC17.73■□□□□ 0.43
TRIM56Q9BRZ2 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
TRIM56Q9BRZ2 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
TRIM56Q9BRZ2 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
TRIM56Q9BRZ2 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
TRIM56Q9BRZ2 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC17.73■□□□□ 0.43
TRIM56Q9BRZ2 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC17.73■□□□□ 0.43
TRIM56Q9BRZ2 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TRIM56Q9BRZ2 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TRIM56Q9BRZ2 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC17.73■□□□□ 0.43
TRIM56Q9BRZ2 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
TRIM56Q9BRZ2 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
TRIM56Q9BRZ2 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TRIM56Q9BRZ2 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TRIM56Q9BRZ2 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
TRIM56Q9BRZ2 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC17.73■□□□□ 0.43
TRIM56Q9BRZ2 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
TRIM56Q9BRZ2 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TRIM56Q9BRZ2 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
TRIM56Q9BRZ2 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TRIM56Q9BRZ2 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
TRIM56Q9BRZ2 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC17.72■□□□□ 0.43
TRIM56Q9BRZ2 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
TRIM56Q9BRZ2 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
TRIM56Q9BRZ2 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC17.72■□□□□ 0.43
TRIM56Q9BRZ2 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC17.72■□□□□ 0.43
TRIM56Q9BRZ2 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC17.72■□□□□ 0.43
TRIM56Q9BRZ2 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
TRIM56Q9BRZ2 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TRIM56Q9BRZ2 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC17.72■□□□□ 0.43
TRIM56Q9BRZ2 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
TRIM56Q9BRZ2 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
TRIM56Q9BRZ2 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TRIM56Q9BRZ2 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC17.72■□□□□ 0.43
TRIM56Q9BRZ2 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
TRIM56Q9BRZ2 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
TRIM56Q9BRZ2 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC17.72■□□□□ 0.43
TRIM56Q9BRZ2 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC17.72■□□□□ 0.43
TRIM56Q9BRZ2 ANKRD20A8P-203ENST00000641373 517 ntBASIC17.72■□□□□ 0.43
TRIM56Q9BRZ2 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TRIM56Q9BRZ2 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC17.72■□□□□ 0.43
TRIM56Q9BRZ2 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TRIM56Q9BRZ2 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
TRIM56Q9BRZ2 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC17.72■□□□□ 0.43
TRIM56Q9BRZ2 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
TRIM56Q9BRZ2 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
TRIM56Q9BRZ2 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
TRIM56Q9BRZ2 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TRIM56Q9BRZ2 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TRIM56Q9BRZ2 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC17.72■□□□□ 0.43
TRIM56Q9BRZ2 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
TRIM56Q9BRZ2 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
TRIM56Q9BRZ2 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC17.71■□□□□ 0.43
TRIM56Q9BRZ2 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
TRIM56Q9BRZ2 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC17.71■□□□□ 0.43
TRIM56Q9BRZ2 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
TRIM56Q9BRZ2 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC17.71■□□□□ 0.43
TRIM56Q9BRZ2 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TRIM56Q9BRZ2 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
TRIM56Q9BRZ2 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC17.71■□□□□ 0.43
TRIM56Q9BRZ2 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
TRIM56Q9BRZ2 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
TRIM56Q9BRZ2 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TRIM56Q9BRZ2 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
TRIM56Q9BRZ2 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
TRIM56Q9BRZ2 AC046185.3-201ENST00000623228 1824 ntBASIC17.71■□□□□ 0.43
TRIM56Q9BRZ2 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC17.71■□□□□ 0.43
TRIM56Q9BRZ2 SLC25A1P3-201ENST00000395415 828 ntBASIC17.71■□□□□ 0.43
TRIM56Q9BRZ2 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
TRIM56Q9BRZ2 TSPY22P-201ENST00000427496 604 ntBASIC17.71■□□□□ 0.43
TRIM56Q9BRZ2 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC17.71■□□□□ 0.43
TRIM56Q9BRZ2 RN7SL606P-201ENST00000472779 293 ntBASIC17.71■□□□□ 0.43
TRIM56Q9BRZ2 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
TRIM56Q9BRZ2 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
TRIM56Q9BRZ2 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC17.71■□□□□ 0.43
TRIM56Q9BRZ2 AC005336.2-201ENST00000593183 939 ntBASIC17.71■□□□□ 0.43
TRIM56Q9BRZ2 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
TRIM56Q9BRZ2 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC17.71■□□□□ 0.43
TRIM56Q9BRZ2 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TRIM56Q9BRZ2 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TRIM56Q9BRZ2 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC17.71■□□□□ 0.43
TRIM56Q9BRZ2 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC17.71■□□□□ 0.43
TRIM56Q9BRZ2 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC17.71■□□□□ 0.43
TRIM56Q9BRZ2 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC17.71■□□□□ 0.43
TRIM56Q9BRZ2 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TRIM56Q9BRZ2 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC17.71■□□□□ 0.43
TRIM56Q9BRZ2 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
TRIM56Q9BRZ2 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC17.71■□□□□ 0.43
TRIM56Q9BRZ2 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC17.71■□□□□ 0.43
TRIM56Q9BRZ2 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TRIM56Q9BRZ2 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
TRIM56Q9BRZ2 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC17.71■□□□□ 0.42
TRIM56Q9BRZ2 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.42
TRIM56Q9BRZ2 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC17.71■□□□□ 0.42
TRIM56Q9BRZ2 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 42.5 ms