Protein–RNA interactions for Protein: Q96GM5

SMARCD1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1Q96GM5 AC009947.1-201ENST00000444350 727 ntBASIC18.22■□□□□ 0.51
SMARCD1Q96GM5 AC108751.1-201ENST00000490852 363 ntBASIC18.22■□□□□ 0.51
SMARCD1Q96GM5 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC18.22■□□□□ 0.51
SMARCD1Q96GM5 IGHV3-65-201ENST00000523210 341 ntBASIC18.22■□□□□ 0.51
SMARCD1Q96GM5 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC18.22■□□□□ 0.51
SMARCD1Q96GM5 AC034105.1-201ENST00000563488 319 ntBASIC18.22■□□□□ 0.51
SMARCD1Q96GM5 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC18.22■□□□□ 0.51
SMARCD1Q96GM5 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
SMARCD1Q96GM5 BOC-212ENST00000485230 2173 ntTSL 2 BASIC18.22■□□□□ 0.51
SMARCD1Q96GM5 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SMARCD1Q96GM5 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SMARCD1Q96GM5 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC18.22■□□□□ 0.51
SMARCD1Q96GM5 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SMARCD1Q96GM5 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC18.22■□□□□ 0.51
SMARCD1Q96GM5 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SMARCD1Q96GM5 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SMARCD1Q96GM5 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
SMARCD1Q96GM5 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SMARCD1Q96GM5 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC18.21■□□□□ 0.51
SMARCD1Q96GM5 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SMARCD1Q96GM5 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
SMARCD1Q96GM5 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
SMARCD1Q96GM5 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
SMARCD1Q96GM5 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
SMARCD1Q96GM5 PMS2P1-201ENST00000431037 1228 ntBASIC18.21■□□□□ 0.51
SMARCD1Q96GM5 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SMARCD1Q96GM5 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
SMARCD1Q96GM5 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC18.21■□□□□ 0.51
SMARCD1Q96GM5 PIN1-206ENST00000587625 878 ntTSL 2 BASIC18.21■□□□□ 0.51
SMARCD1Q96GM5 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC18.21■□□□□ 0.51
SMARCD1Q96GM5 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
SMARCD1Q96GM5 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC18.21■□□□□ 0.51
SMARCD1Q96GM5 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC18.21■□□□□ 0.51
SMARCD1Q96GM5 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SMARCD1Q96GM5 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
SMARCD1Q96GM5 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SMARCD1Q96GM5 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SMARCD1Q96GM5 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC18.21■□□□□ 0.51
SMARCD1Q96GM5 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
SMARCD1Q96GM5 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
SMARCD1Q96GM5 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SMARCD1Q96GM5 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
SMARCD1Q96GM5 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
SMARCD1Q96GM5 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
SMARCD1Q96GM5 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC18.2■□□□□ 0.5
SMARCD1Q96GM5 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC18.2■□□□□ 0.5
SMARCD1Q96GM5 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SMARCD1Q96GM5 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
SMARCD1Q96GM5 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC18.2■□□□□ 0.5
SMARCD1Q96GM5 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC18.2■□□□□ 0.5
SMARCD1Q96GM5 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC18.2■□□□□ 0.5
SMARCD1Q96GM5 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SMARCD1Q96GM5 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC18.2■□□□□ 0.5
SMARCD1Q96GM5 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SMARCD1Q96GM5 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC18.2■□□□□ 0.5
SMARCD1Q96GM5 CAND2-206ENST00000626378 333 ntTSL 5 BASIC18.2■□□□□ 0.5
SMARCD1Q96GM5 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
SMARCD1Q96GM5 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SMARCD1Q96GM5 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SMARCD1Q96GM5 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
SMARCD1Q96GM5 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
SMARCD1Q96GM5 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC18.2■□□□□ 0.5
SMARCD1Q96GM5 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
SMARCD1Q96GM5 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
SMARCD1Q96GM5 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SMARCD1Q96GM5 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC18.19■□□□□ 0.5
SMARCD1Q96GM5 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC18.19■□□□□ 0.5
SMARCD1Q96GM5 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SMARCD1Q96GM5 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
SMARCD1Q96GM5 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
SMARCD1Q96GM5 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC18.19■□□□□ 0.5
SMARCD1Q96GM5 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
SMARCD1Q96GM5 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
SMARCD1Q96GM5 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SMARCD1Q96GM5 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SMARCD1Q96GM5 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
SMARCD1Q96GM5 MIR574-201ENST00000385209 96 ntBASIC18.19■□□□□ 0.5
SMARCD1Q96GM5 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
SMARCD1Q96GM5 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC18.19■□□□□ 0.5
SMARCD1Q96GM5 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
SMARCD1Q96GM5 METTL26-205ENST00000397666 726 ntTSL 2 BASIC18.19■□□□□ 0.5
SMARCD1Q96GM5 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC18.19■□□□□ 0.5
SMARCD1Q96GM5 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC18.19■□□□□ 0.5
SMARCD1Q96GM5 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
SMARCD1Q96GM5 AC108073.2-201ENST00000464002 357 ntBASIC18.19■□□□□ 0.5
SMARCD1Q96GM5 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SMARCD1Q96GM5 KRT18P58-201ENST00000527480 1120 ntBASIC18.19■□□□□ 0.5
SMARCD1Q96GM5 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC18.19■□□□□ 0.5
SMARCD1Q96GM5 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC18.19■□□□□ 0.5
SMARCD1Q96GM5 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
SMARCD1Q96GM5 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC18.19■□□□□ 0.5
SMARCD1Q96GM5 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
SMARCD1Q96GM5 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC18.19■□□□□ 0.5
SMARCD1Q96GM5 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
SMARCD1Q96GM5 GGTLC5P-201ENST00000617623 998 ntBASIC18.19■□□□□ 0.5
SMARCD1Q96GM5 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SMARCD1Q96GM5 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SMARCD1Q96GM5 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC18.19■□□□□ 0.5
SMARCD1Q96GM5 MCC-208ENST00000514701 2855 ntTSL 2 BASIC18.19■□□□□ 0.5
SMARCD1Q96GM5 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC18.19■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 40.9 ms