Protein–RNA interactions for Protein: Q969T3

SNX21, Sorting nexin-21, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX21Q969T3 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SNX21Q969T3 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SNX21Q969T3 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SNX21Q969T3 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
SNX21Q969T3 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC20.56■□□□□ 0.88
SNX21Q969T3 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SNX21Q969T3 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
SNX21Q969T3 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC20.56■□□□□ 0.88
SNX21Q969T3 AC005332.3-201ENST00000589904 676 ntBASIC20.56■□□□□ 0.88
SNX21Q969T3 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC20.56■□□□□ 0.88
SNX21Q969T3 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC20.56■□□□□ 0.88
SNX21Q969T3 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC20.56■□□□□ 0.88
SNX21Q969T3 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
SNX21Q969T3 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
SNX21Q969T3 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SNX21Q969T3 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SNX21Q969T3 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC20.56■□□□□ 0.88
SNX21Q969T3 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
SNX21Q969T3 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SNX21Q969T3 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SNX21Q969T3 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC20.55■□□□□ 0.88
SNX21Q969T3 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
SNX21Q969T3 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
SNX21Q969T3 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC20.55■□□□□ 0.88
SNX21Q969T3 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC20.55■□□□□ 0.88
SNX21Q969T3 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
SNX21Q969T3 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
SNX21Q969T3 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC20.55■□□□□ 0.88
SNX21Q969T3 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC20.55■□□□□ 0.88
SNX21Q969T3 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SNX21Q969T3 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SNX21Q969T3 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SNX21Q969T3 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC20.55■□□□□ 0.88
SNX21Q969T3 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SNX21Q969T3 AL645728.1-201ENST00000366221 2101 ntBASIC20.55■□□□□ 0.88
SNX21Q969T3 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC20.55■□□□□ 0.88
SNX21Q969T3 SPEG-225ENST00000617028 815 ntTSL 5 BASIC20.55■□□□□ 0.88
SNX21Q969T3 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
SNX21Q969T3 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
SNX21Q969T3 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
SNX21Q969T3 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC20.55■□□□□ 0.88
SNX21Q969T3 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
SNX21Q969T3 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC20.55■□□□□ 0.88
SNX21Q969T3 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC20.55■□□□□ 0.88
SNX21Q969T3 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC20.55■□□□□ 0.88
SNX21Q969T3 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
SNX21Q969T3 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
SNX21Q969T3 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SNX21Q969T3 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SNX21Q969T3 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC20.54■□□□□ 0.88
SNX21Q969T3 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC20.54■□□□□ 0.88
SNX21Q969T3 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC20.54■□□□□ 0.88
SNX21Q969T3 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC20.54■□□□□ 0.88
SNX21Q969T3 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
SNX21Q969T3 FUT8-AS1-201ENST00000621019 1521 ntBASIC20.54■□□□□ 0.88
SNX21Q969T3 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
SNX21Q969T3 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC20.54■□□□□ 0.88
SNX21Q969T3 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SNX21Q969T3 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SNX21Q969T3 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC20.54■□□□□ 0.88
SNX21Q969T3 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
SNX21Q969T3 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
SNX21Q969T3 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
SNX21Q969T3 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC20.54■□□□□ 0.88
SNX21Q969T3 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC20.54■□□□□ 0.88
SNX21Q969T3 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC20.54■□□□□ 0.88
SNX21Q969T3 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
SNX21Q969T3 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC20.54■□□□□ 0.88
SNX21Q969T3 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
SNX21Q969T3 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
SNX21Q969T3 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
SNX21Q969T3 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
SNX21Q969T3 AL135999.2-201ENST00000622438 1686 ntBASIC20.54■□□□□ 0.88
SNX21Q969T3 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC20.54■□□□□ 0.88
SNX21Q969T3 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
SNX21Q969T3 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SNX21Q969T3 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SNX21Q969T3 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SNX21Q969T3 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SNX21Q969T3 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC20.54■□□□□ 0.88
SNX21Q969T3 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
SNX21Q969T3 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC20.53■□□□□ 0.88
SNX21Q969T3 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC20.53■□□□□ 0.88
SNX21Q969T3 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
SNX21Q969T3 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC20.53■□□□□ 0.88
SNX21Q969T3 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
SNX21Q969T3 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC20.53■□□□□ 0.88
SNX21Q969T3 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
SNX21Q969T3 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC20.53■□□□□ 0.88
SNX21Q969T3 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SNX21Q969T3 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SNX21Q969T3 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC20.53■□□□□ 0.88
SNX21Q969T3 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC20.53■□□□□ 0.88
SNX21Q969T3 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
SNX21Q969T3 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC20.53■□□□□ 0.88
SNX21Q969T3 COX11P1-201ENST00000489116 835 ntBASIC20.53■□□□□ 0.88
SNX21Q969T3 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
SNX21Q969T3 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC20.53■□□□□ 0.88
SNX21Q969T3 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC20.53■□□□□ 0.88
SNX21Q969T3 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC20.53■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 42.7 ms