Protein–RNA interactions for Protein: Q8WWV3

RTN4IP1, Reticulon-4-interacting protein 1, mitochondrial, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1Q8WWV3 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC14.65□□□□□ -0.06
RTN4IP1Q8WWV3 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC14.65□□□□□ -0.06
RTN4IP1Q8WWV3 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
RTN4IP1Q8WWV3 HYMAI.1-201ENST00000620949 238 ntBASIC14.65□□□□□ -0.06
RTN4IP1Q8WWV3 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
RTN4IP1Q8WWV3 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
RTN4IP1Q8WWV3 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
RTN4IP1Q8WWV3 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
RTN4IP1Q8WWV3 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
RTN4IP1Q8WWV3 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC14.65□□□□□ -0.06
RTN4IP1Q8WWV3 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
RTN4IP1Q8WWV3 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
RTN4IP1Q8WWV3 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
RTN4IP1Q8WWV3 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
RTN4IP1Q8WWV3 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
RTN4IP1Q8WWV3 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
RTN4IP1Q8WWV3 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
RTN4IP1Q8WWV3 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC14.65□□□□□ -0.06
RTN4IP1Q8WWV3 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC14.65□□□□□ -0.07
RTN4IP1Q8WWV3 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
RTN4IP1Q8WWV3 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
RTN4IP1Q8WWV3 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
RTN4IP1Q8WWV3 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
RTN4IP1Q8WWV3 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC14.64□□□□□ -0.07
RTN4IP1Q8WWV3 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC14.64□□□□□ -0.07
RTN4IP1Q8WWV3 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC14.64□□□□□ -0.07
RTN4IP1Q8WWV3 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC14.64□□□□□ -0.07
RTN4IP1Q8WWV3 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC14.64□□□□□ -0.07
RTN4IP1Q8WWV3 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
RTN4IP1Q8WWV3 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
RTN4IP1Q8WWV3 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
RTN4IP1Q8WWV3 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
RTN4IP1Q8WWV3 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
RTN4IP1Q8WWV3 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
RTN4IP1Q8WWV3 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC14.64□□□□□ -0.07
RTN4IP1Q8WWV3 MIR662-201ENST00000384847 95 ntBASIC14.64□□□□□ -0.07
RTN4IP1Q8WWV3 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC14.64□□□□□ -0.07
RTN4IP1Q8WWV3 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
RTN4IP1Q8WWV3 AL671277.2-201ENST00000458060 996 ntBASIC14.64□□□□□ -0.07
RTN4IP1Q8WWV3 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC14.64□□□□□ -0.07
RTN4IP1Q8WWV3 LY6E-213ENST00000522528 606 ntTSL 3 BASIC14.64□□□□□ -0.07
RTN4IP1Q8WWV3 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC14.64□□□□□ -0.07
RTN4IP1Q8WWV3 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC14.64□□□□□ -0.07
RTN4IP1Q8WWV3 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC14.64□□□□□ -0.07
RTN4IP1Q8WWV3 DFFB-212ENST00000625756 649 ntTSL 5 BASIC14.64□□□□□ -0.07
RTN4IP1Q8WWV3 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
RTN4IP1Q8WWV3 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
RTN4IP1Q8WWV3 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
RTN4IP1Q8WWV3 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC14.64□□□□□ -0.07
RTN4IP1Q8WWV3 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
RTN4IP1Q8WWV3 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC14.64□□□□□ -0.07
RTN4IP1Q8WWV3 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
RTN4IP1Q8WWV3 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC14.64□□□□□ -0.07
RTN4IP1Q8WWV3 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC14.64□□□□□ -0.07
RTN4IP1Q8WWV3 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
RTN4IP1Q8WWV3 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
RTN4IP1Q8WWV3 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC14.64□□□□□ -0.07
RTN4IP1Q8WWV3 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
RTN4IP1Q8WWV3 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC14.64□□□□□ -0.07
RTN4IP1Q8WWV3 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC14.64□□□□□ -0.07
RTN4IP1Q8WWV3 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
RTN4IP1Q8WWV3 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
RTN4IP1Q8WWV3 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
RTN4IP1Q8WWV3 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
RTN4IP1Q8WWV3 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
RTN4IP1Q8WWV3 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC14.63□□□□□ -0.07
RTN4IP1Q8WWV3 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC14.63□□□□□ -0.07
RTN4IP1Q8WWV3 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC14.63□□□□□ -0.07
RTN4IP1Q8WWV3 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
RTN4IP1Q8WWV3 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
RTN4IP1Q8WWV3 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
RTN4IP1Q8WWV3 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
RTN4IP1Q8WWV3 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
RTN4IP1Q8WWV3 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
RTN4IP1Q8WWV3 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
RTN4IP1Q8WWV3 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
RTN4IP1Q8WWV3 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC14.63□□□□□ -0.07
RTN4IP1Q8WWV3 SAPCD2P2-201ENST00000431719 1174 ntBASIC14.63□□□□□ -0.07
RTN4IP1Q8WWV3 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
RTN4IP1Q8WWV3 FAM210CP-201ENST00000445714 574 ntBASIC14.63□□□□□ -0.07
RTN4IP1Q8WWV3 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC14.63□□□□□ -0.07
RTN4IP1Q8WWV3 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
RTN4IP1Q8WWV3 AP003733.1-201ENST00000491725 852 ntBASIC14.63□□□□□ -0.07
RTN4IP1Q8WWV3 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC14.63□□□□□ -0.07
RTN4IP1Q8WWV3 VENTXP5-201ENST00000523979 775 ntBASIC14.63□□□□□ -0.07
RTN4IP1Q8WWV3 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
RTN4IP1Q8WWV3 PPOX-214ENST00000535223 664 ntTSL 3 BASIC14.63□□□□□ -0.07
RTN4IP1Q8WWV3 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC14.63□□□□□ -0.07
RTN4IP1Q8WWV3 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC14.63□□□□□ -0.07
RTN4IP1Q8WWV3 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC14.63□□□□□ -0.07
RTN4IP1Q8WWV3 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
RTN4IP1Q8WWV3 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
RTN4IP1Q8WWV3 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
RTN4IP1Q8WWV3 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC14.63□□□□□ -0.07
RTN4IP1Q8WWV3 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC14.63□□□□□ -0.07
RTN4IP1Q8WWV3 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
RTN4IP1Q8WWV3 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC14.63□□□□□ -0.07
RTN4IP1Q8WWV3 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
RTN4IP1Q8WWV3 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
RTN4IP1Q8WWV3 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC14.63□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms