Protein–RNA interactions for Protein: Q8TCU5

GRIN3A, Glutamate receptor ionotropic, NMDA 3A, humanhuman

Predictions only

Length 1,115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GRIN3AQ8TCU5 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
GRIN3AQ8TCU5 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC17.72■□□□□ 0.43
GRIN3AQ8TCU5 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
GRIN3AQ8TCU5 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
GRIN3AQ8TCU5 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC17.71■□□□□ 0.43
GRIN3AQ8TCU5 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
GRIN3AQ8TCU5 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC17.71■□□□□ 0.43
GRIN3AQ8TCU5 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
GRIN3AQ8TCU5 LINC00896-202ENST00000609602 2128 ntBASIC17.71■□□□□ 0.43
GRIN3AQ8TCU5 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
GRIN3AQ8TCU5 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
GRIN3AQ8TCU5 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC17.71■□□□□ 0.43
GRIN3AQ8TCU5 RPS2P28-201ENST00000314255 741 ntBASIC17.71■□□□□ 0.43
GRIN3AQ8TCU5 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC17.71■□□□□ 0.43
GRIN3AQ8TCU5 AC003669.1-201ENST00000334569 611 ntBASIC17.71■□□□□ 0.43
GRIN3AQ8TCU5 AL020989.1-201ENST00000422979 469 ntBASIC17.71■□□□□ 0.43
GRIN3AQ8TCU5 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
GRIN3AQ8TCU5 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC17.71■□□□□ 0.43
GRIN3AQ8TCU5 LITAF-211ENST00000572255 516 ntTSL 4 BASIC17.71■□□□□ 0.43
GRIN3AQ8TCU5 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC17.71■□□□□ 0.43
GRIN3AQ8TCU5 COPE-211ENST00000600932 1144 ntTSL 5 BASIC17.71■□□□□ 0.43
GRIN3AQ8TCU5 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC17.71■□□□□ 0.43
GRIN3AQ8TCU5 AC073592.4-201ENST00000623827 446 ntBASIC17.71■□□□□ 0.43
GRIN3AQ8TCU5 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC17.71■□□□□ 0.43
GRIN3AQ8TCU5 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
GRIN3AQ8TCU5 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
GRIN3AQ8TCU5 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC17.71■□□□□ 0.43
GRIN3AQ8TCU5 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC17.71■□□□□ 0.43
GRIN3AQ8TCU5 AC080080.1-201ENST00000625121 2420 ntBASIC17.71■□□□□ 0.43
GRIN3AQ8TCU5 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC17.71■□□□□ 0.43
GRIN3AQ8TCU5 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC17.71■□□□□ 0.42
GRIN3AQ8TCU5 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
GRIN3AQ8TCU5 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC17.71■□□□□ 0.42
GRIN3AQ8TCU5 IL9RP2-201ENST00000423948 1312 ntBASIC17.71■□□□□ 0.42
GRIN3AQ8TCU5 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
GRIN3AQ8TCU5 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC17.71■□□□□ 0.42
GRIN3AQ8TCU5 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.42
GRIN3AQ8TCU5 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC17.7■□□□□ 0.42
GRIN3AQ8TCU5 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC17.7■□□□□ 0.42
GRIN3AQ8TCU5 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
GRIN3AQ8TCU5 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
GRIN3AQ8TCU5 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC17.7■□□□□ 0.42
GRIN3AQ8TCU5 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
GRIN3AQ8TCU5 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
GRIN3AQ8TCU5 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC17.7■□□□□ 0.42
GRIN3AQ8TCU5 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
GRIN3AQ8TCU5 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
GRIN3AQ8TCU5 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
GRIN3AQ8TCU5 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
GRIN3AQ8TCU5 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
GRIN3AQ8TCU5 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC17.7■□□□□ 0.42
GRIN3AQ8TCU5 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC17.7■□□□□ 0.42
GRIN3AQ8TCU5 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC17.7■□□□□ 0.42
GRIN3AQ8TCU5 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC17.7■□□□□ 0.42
GRIN3AQ8TCU5 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC17.7■□□□□ 0.42
GRIN3AQ8TCU5 AC139887.3-201ENST00000568585 713 ntBASIC17.7■□□□□ 0.42
GRIN3AQ8TCU5 SDCCAG3P1-201ENST00000589292 1150 ntBASIC17.7■□□□□ 0.42
GRIN3AQ8TCU5 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
GRIN3AQ8TCU5 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC17.7■□□□□ 0.42
GRIN3AQ8TCU5 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC17.7■□□□□ 0.42
GRIN3AQ8TCU5 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC17.7■□□□□ 0.42
GRIN3AQ8TCU5 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC17.7■□□□□ 0.42
GRIN3AQ8TCU5 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
GRIN3AQ8TCU5 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
GRIN3AQ8TCU5 SIGLEC16-201ENST00000599858 1437 ntBASIC17.7■□□□□ 0.42
GRIN3AQ8TCU5 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
GRIN3AQ8TCU5 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
GRIN3AQ8TCU5 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.7■□□□□ 0.42
GRIN3AQ8TCU5 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC17.7■□□□□ 0.42
GRIN3AQ8TCU5 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC17.7■□□□□ 0.42
GRIN3AQ8TCU5 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC17.7■□□□□ 0.42
GRIN3AQ8TCU5 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC17.7■□□□□ 0.42
GRIN3AQ8TCU5 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
GRIN3AQ8TCU5 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC17.7■□□□□ 0.42
GRIN3AQ8TCU5 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC17.7■□□□□ 0.42
GRIN3AQ8TCU5 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC17.7■□□□□ 0.42
GRIN3AQ8TCU5 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
GRIN3AQ8TCU5 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
GRIN3AQ8TCU5 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
GRIN3AQ8TCU5 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
GRIN3AQ8TCU5 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC17.69■□□□□ 0.42
GRIN3AQ8TCU5 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
GRIN3AQ8TCU5 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
GRIN3AQ8TCU5 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC17.69■□□□□ 0.42
GRIN3AQ8TCU5 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
GRIN3AQ8TCU5 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC17.69■□□□□ 0.42
GRIN3AQ8TCU5 HLA-J-201ENST00000462773 1622 ntBASIC17.69■□□□□ 0.42
GRIN3AQ8TCU5 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
GRIN3AQ8TCU5 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
GRIN3AQ8TCU5 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
GRIN3AQ8TCU5 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
GRIN3AQ8TCU5 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC17.69■□□□□ 0.42
GRIN3AQ8TCU5 REXO1L11P-201ENST00000620964 1927 ntBASIC17.69■□□□□ 0.42
GRIN3AQ8TCU5 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
GRIN3AQ8TCU5 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
GRIN3AQ8TCU5 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
GRIN3AQ8TCU5 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
GRIN3AQ8TCU5 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC17.69■□□□□ 0.42
GRIN3AQ8TCU5 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
GRIN3AQ8TCU5 AC002558.1-201ENST00000488906 803 ntBASIC17.69■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms