Protein–RNA interactions for Protein: Q8TBE1

CNIH3, Protein cornichon homolog 3, humanhuman

Predictions only

Length 160 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNIH3Q8TBE1 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CNIH3Q8TBE1 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CNIH3Q8TBE1 SEC1P-202ENST00000473944 940 ntBASIC15.9■□□□□ 0.14
CNIH3Q8TBE1 NUDT16P1-203ENST00000513809 620 ntBASIC15.9■□□□□ 0.14
CNIH3Q8TBE1 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CNIH3Q8TBE1 AL353719.1-201ENST00000566847 864 ntBASIC15.9■□□□□ 0.14
CNIH3Q8TBE1 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC15.9■□□□□ 0.14
CNIH3Q8TBE1 MIR4651-201ENST00000582622 73 ntBASIC15.9■□□□□ 0.14
CNIH3Q8TBE1 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC15.9■□□□□ 0.14
CNIH3Q8TBE1 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
CNIH3Q8TBE1 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC15.9■□□□□ 0.14
CNIH3Q8TBE1 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
CNIH3Q8TBE1 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CNIH3Q8TBE1 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
CNIH3Q8TBE1 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CNIH3Q8TBE1 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
CNIH3Q8TBE1 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CNIH3Q8TBE1 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
CNIH3Q8TBE1 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC15.9■□□□□ 0.14
CNIH3Q8TBE1 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
CNIH3Q8TBE1 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC15.9■□□□□ 0.14
CNIH3Q8TBE1 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC15.9■□□□□ 0.14
CNIH3Q8TBE1 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC15.89■□□□□ 0.13
CNIH3Q8TBE1 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CNIH3Q8TBE1 AC024909.3-201ENST00000611513 2257 ntBASIC15.89■□□□□ 0.13
CNIH3Q8TBE1 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CNIH3Q8TBE1 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
CNIH3Q8TBE1 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC15.89■□□□□ 0.13
CNIH3Q8TBE1 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CNIH3Q8TBE1 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CNIH3Q8TBE1 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CNIH3Q8TBE1 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CNIH3Q8TBE1 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
CNIH3Q8TBE1 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CNIH3Q8TBE1 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
CNIH3Q8TBE1 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC15.89■□□□□ 0.13
CNIH3Q8TBE1 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
CNIH3Q8TBE1 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC15.89■□□□□ 0.13
CNIH3Q8TBE1 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CNIH3Q8TBE1 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC15.89■□□□□ 0.13
CNIH3Q8TBE1 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC15.89■□□□□ 0.13
CNIH3Q8TBE1 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC15.89■□□□□ 0.13
CNIH3Q8TBE1 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC15.89■□□□□ 0.13
CNIH3Q8TBE1 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CNIH3Q8TBE1 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CNIH3Q8TBE1 MMD2-204ENST00000612910 778 ntTSL 5 BASIC15.89■□□□□ 0.13
CNIH3Q8TBE1 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
CNIH3Q8TBE1 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
CNIH3Q8TBE1 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
CNIH3Q8TBE1 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CNIH3Q8TBE1 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CNIH3Q8TBE1 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC15.89■□□□□ 0.13
CNIH3Q8TBE1 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CNIH3Q8TBE1 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CNIH3Q8TBE1 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC15.89■□□□□ 0.13
CNIH3Q8TBE1 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
CNIH3Q8TBE1 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CNIH3Q8TBE1 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CNIH3Q8TBE1 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
CNIH3Q8TBE1 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC15.89■□□□□ 0.13
CNIH3Q8TBE1 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CNIH3Q8TBE1 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
CNIH3Q8TBE1 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CNIH3Q8TBE1 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CNIH3Q8TBE1 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
CNIH3Q8TBE1 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CNIH3Q8TBE1 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CNIH3Q8TBE1 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CNIH3Q8TBE1 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC15.88■□□□□ 0.13
CNIH3Q8TBE1 KRT8P9-201ENST00000558927 1449 ntBASIC15.88■□□□□ 0.13
CNIH3Q8TBE1 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CNIH3Q8TBE1 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC15.88■□□□□ 0.13
CNIH3Q8TBE1 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC15.88■□□□□ 0.13
CNIH3Q8TBE1 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CNIH3Q8TBE1 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC15.88■□□□□ 0.13
CNIH3Q8TBE1 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC15.88■□□□□ 0.13
CNIH3Q8TBE1 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CNIH3Q8TBE1 KRT18P65-201ENST00000439811 1286 ntBASIC15.88■□□□□ 0.13
CNIH3Q8TBE1 RPPH1-201ENST00000516869 333 ntBASIC15.88■□□□□ 0.13
CNIH3Q8TBE1 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC15.88■□□□□ 0.13
CNIH3Q8TBE1 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CNIH3Q8TBE1 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CNIH3Q8TBE1 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC15.88■□□□□ 0.13
CNIH3Q8TBE1 PBK-203ENST00000522944 1499 ntTSL 2 BASIC15.88■□□□□ 0.13
CNIH3Q8TBE1 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CNIH3Q8TBE1 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC15.88■□□□□ 0.13
CNIH3Q8TBE1 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CNIH3Q8TBE1 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CNIH3Q8TBE1 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CNIH3Q8TBE1 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CNIH3Q8TBE1 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
CNIH3Q8TBE1 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC15.88■□□□□ 0.13
CNIH3Q8TBE1 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CNIH3Q8TBE1 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CNIH3Q8TBE1 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
CNIH3Q8TBE1 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
CNIH3Q8TBE1 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
CNIH3Q8TBE1 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CNIH3Q8TBE1 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
CNIH3Q8TBE1 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 50 ms