Protein–RNA interactions for Protein: Q8NEP3

DNAAF1, Dynein assembly factor 1, axonemal, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNAAF1Q8NEP3 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
DNAAF1Q8NEP3 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
DNAAF1Q8NEP3 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
DNAAF1Q8NEP3 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
DNAAF1Q8NEP3 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
DNAAF1Q8NEP3 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
DNAAF1Q8NEP3 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC15.32■□□□□ 0.04
DNAAF1Q8NEP3 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
DNAAF1Q8NEP3 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
DNAAF1Q8NEP3 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
DNAAF1Q8NEP3 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
DNAAF1Q8NEP3 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
DNAAF1Q8NEP3 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
DNAAF1Q8NEP3 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
DNAAF1Q8NEP3 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
DNAAF1Q8NEP3 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
DNAAF1Q8NEP3 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
DNAAF1Q8NEP3 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
DNAAF1Q8NEP3 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
DNAAF1Q8NEP3 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
DNAAF1Q8NEP3 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
DNAAF1Q8NEP3 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC15.31■□□□□ 0.04
DNAAF1Q8NEP3 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
DNAAF1Q8NEP3 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC15.31■□□□□ 0.04
DNAAF1Q8NEP3 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC15.31■□□□□ 0.04
DNAAF1Q8NEP3 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC15.31■□□□□ 0.04
DNAAF1Q8NEP3 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
DNAAF1Q8NEP3 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
DNAAF1Q8NEP3 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
DNAAF1Q8NEP3 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
DNAAF1Q8NEP3 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
DNAAF1Q8NEP3 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
DNAAF1Q8NEP3 DOC2GP-204ENST00000639052 2548 ntBASIC15.31■□□□□ 0.04
DNAAF1Q8NEP3 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
DNAAF1Q8NEP3 CD70-202ENST00000423145 881 ntTSL 2 BASIC15.31■□□□□ 0.04
DNAAF1Q8NEP3 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
DNAAF1Q8NEP3 TEN1-204ENST00000588202 862 ntTSL 3 BASIC15.31■□□□□ 0.04
DNAAF1Q8NEP3 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
DNAAF1Q8NEP3 AL023973.1-201ENST00000624619 620 ntBASIC15.31■□□□□ 0.04
DNAAF1Q8NEP3 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC15.31■□□□□ 0.04
DNAAF1Q8NEP3 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
DNAAF1Q8NEP3 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
DNAAF1Q8NEP3 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC15.31■□□□□ 0.04
DNAAF1Q8NEP3 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC15.31■□□□□ 0.04
DNAAF1Q8NEP3 LGALS8-AS1-201ENST00000487567 1457 ntBASIC15.31■□□□□ 0.04
DNAAF1Q8NEP3 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
DNAAF1Q8NEP3 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
DNAAF1Q8NEP3 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC15.31■□□□□ 0.04
DNAAF1Q8NEP3 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
DNAAF1Q8NEP3 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC15.31■□□□□ 0.04
DNAAF1Q8NEP3 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC15.31■□□□□ 0.04
DNAAF1Q8NEP3 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
DNAAF1Q8NEP3 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
DNAAF1Q8NEP3 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
DNAAF1Q8NEP3 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
DNAAF1Q8NEP3 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
DNAAF1Q8NEP3 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
DNAAF1Q8NEP3 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
DNAAF1Q8NEP3 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC15.3■□□□□ 0.04
DNAAF1Q8NEP3 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
DNAAF1Q8NEP3 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
DNAAF1Q8NEP3 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
DNAAF1Q8NEP3 HS6ST3-201ENST00000376705 7804 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
DNAAF1Q8NEP3 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
DNAAF1Q8NEP3 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
DNAAF1Q8NEP3 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
DNAAF1Q8NEP3 STARP1-201ENST00000397973 869 ntBASIC15.3■□□□□ 0.04
DNAAF1Q8NEP3 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
DNAAF1Q8NEP3 DDT-203ENST00000403754 569 ntTSL 3 BASIC15.3■□□□□ 0.04
DNAAF1Q8NEP3 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
DNAAF1Q8NEP3 DDT-206ENST00000430101 573 ntTSL 2 BASIC15.3■□□□□ 0.04
DNAAF1Q8NEP3 HLA-F-220ENST00000434407 884 ntBASIC15.3■□□□□ 0.04
DNAAF1Q8NEP3 KRT18P48-201ENST00000434763 852 ntBASIC15.3■□□□□ 0.04
DNAAF1Q8NEP3 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
DNAAF1Q8NEP3 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC15.3■□□□□ 0.04
DNAAF1Q8NEP3 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC15.3■□□□□ 0.04
DNAAF1Q8NEP3 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
DNAAF1Q8NEP3 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
DNAAF1Q8NEP3 AC009154.2-201ENST00000621177 724 ntBASIC15.3■□□□□ 0.04
DNAAF1Q8NEP3 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC15.3■□□□□ 0.04
DNAAF1Q8NEP3 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
DNAAF1Q8NEP3 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
DNAAF1Q8NEP3 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
DNAAF1Q8NEP3 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC15.3■□□□□ 0.04
DNAAF1Q8NEP3 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
DNAAF1Q8NEP3 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
DNAAF1Q8NEP3 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC15.3■□□□□ 0.04
DNAAF1Q8NEP3 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
DNAAF1Q8NEP3 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC15.29■□□□□ 0.04
DNAAF1Q8NEP3 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
DNAAF1Q8NEP3 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
DNAAF1Q8NEP3 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
DNAAF1Q8NEP3 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC15.29■□□□□ 0.04
DNAAF1Q8NEP3 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
DNAAF1Q8NEP3 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
DNAAF1Q8NEP3 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
DNAAF1Q8NEP3 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
DNAAF1Q8NEP3 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC15.29■□□□□ 0.04
DNAAF1Q8NEP3 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
DNAAF1Q8NEP3 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms