Protein–RNA interactions for Protein: Q8NE35

CPEB3, Cytoplasmic polyadenylation element-binding protein 3, humanhuman

Known RBP Predictions only

Length 698 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPEB3Q8NE35 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CPEB3Q8NE35 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC15.2■□□□□ 0.02
CPEB3Q8NE35 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC15.2■□□□□ 0.02
CPEB3Q8NE35 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC15.2■□□□□ 0.02
CPEB3Q8NE35 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CPEB3Q8NE35 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CPEB3Q8NE35 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CPEB3Q8NE35 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC15.2■□□□□ 0.02
CPEB3Q8NE35 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CPEB3Q8NE35 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC15.2■□□□□ 0.02
CPEB3Q8NE35 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC15.2■□□□□ 0.02
CPEB3Q8NE35 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
CPEB3Q8NE35 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
CPEB3Q8NE35 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CPEB3Q8NE35 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC15.2■□□□□ 0.02
CPEB3Q8NE35 AP005117.1-201ENST00000584346 1413 ntBASIC15.2■□□□□ 0.02
CPEB3Q8NE35 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
CPEB3Q8NE35 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC15.2■□□□□ 0.02
CPEB3Q8NE35 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CPEB3Q8NE35 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CPEB3Q8NE35 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CPEB3Q8NE35 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CPEB3Q8NE35 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CPEB3Q8NE35 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC15.2■□□□□ 0.02
CPEB3Q8NE35 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CPEB3Q8NE35 DUSP5P1-201ENST00000441325 1139 ntBASIC15.2■□□□□ 0.02
CPEB3Q8NE35 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
CPEB3Q8NE35 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC15.2■□□□□ 0.02
CPEB3Q8NE35 STK19B-204ENST00000512515 211 ntBASIC15.2■□□□□ 0.02
CPEB3Q8NE35 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC15.2■□□□□ 0.02
CPEB3Q8NE35 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC15.2■□□□□ 0.02
CPEB3Q8NE35 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC15.2■□□□□ 0.02
CPEB3Q8NE35 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CPEB3Q8NE35 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC15.2■□□□□ 0.02
CPEB3Q8NE35 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
CPEB3Q8NE35 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CPEB3Q8NE35 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
CPEB3Q8NE35 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC15.2■□□□□ 0.02
CPEB3Q8NE35 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC15.2■□□□□ 0.02
CPEB3Q8NE35 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC15.2■□□□□ 0.02
CPEB3Q8NE35 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CPEB3Q8NE35 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC15.2■□□□□ 0.02
CPEB3Q8NE35 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CPEB3Q8NE35 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CPEB3Q8NE35 AC009336.1-201ENST00000608941 1553 ntBASIC15.19■□□□□ 0.02
CPEB3Q8NE35 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CPEB3Q8NE35 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CPEB3Q8NE35 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC15.19■□□□□ 0.02
CPEB3Q8NE35 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC15.19■□□□□ 0.02
CPEB3Q8NE35 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CPEB3Q8NE35 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
CPEB3Q8NE35 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CPEB3Q8NE35 AC003669.1-201ENST00000334569 611 ntBASIC15.19■□□□□ 0.02
CPEB3Q8NE35 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC15.19■□□□□ 0.02
CPEB3Q8NE35 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CPEB3Q8NE35 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC15.19■□□□□ 0.02
CPEB3Q8NE35 KLF4P1-201ENST00000412782 1185 ntBASIC15.19■□□□□ 0.02
CPEB3Q8NE35 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CPEB3Q8NE35 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC15.19■□□□□ 0.02
CPEB3Q8NE35 UNC93B7-201ENST00000509439 705 ntBASIC15.19■□□□□ 0.02
CPEB3Q8NE35 PP7080-204ENST00000510714 601 ntTSL 3 BASIC15.19■□□□□ 0.02
CPEB3Q8NE35 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC15.19■□□□□ 0.02
CPEB3Q8NE35 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CPEB3Q8NE35 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CPEB3Q8NE35 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
CPEB3Q8NE35 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CPEB3Q8NE35 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC15.19■□□□□ 0.02
CPEB3Q8NE35 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
CPEB3Q8NE35 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC15.19■□□□□ 0.02
CPEB3Q8NE35 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
CPEB3Q8NE35 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CPEB3Q8NE35 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CPEB3Q8NE35 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC15.19■□□□□ 0.02
CPEB3Q8NE35 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CPEB3Q8NE35 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CPEB3Q8NE35 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC15.19■□□□□ 0.02
CPEB3Q8NE35 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CPEB3Q8NE35 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC15.19■□□□□ 0.02
CPEB3Q8NE35 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CPEB3Q8NE35 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CPEB3Q8NE35 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
CPEB3Q8NE35 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
CPEB3Q8NE35 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
CPEB3Q8NE35 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC15.18■□□□□ 0.02
CPEB3Q8NE35 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
CPEB3Q8NE35 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CPEB3Q8NE35 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC15.18■□□□□ 0.02
CPEB3Q8NE35 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC15.18■□□□□ 0.02
CPEB3Q8NE35 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CPEB3Q8NE35 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
CPEB3Q8NE35 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
CPEB3Q8NE35 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
CPEB3Q8NE35 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
CPEB3Q8NE35 AL023806.1-201ENST00000603994 1649 ntBASIC15.18■□□□□ 0.02
CPEB3Q8NE35 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CPEB3Q8NE35 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
CPEB3Q8NE35 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CPEB3Q8NE35 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC15.18■□□□□ 0.02
CPEB3Q8NE35 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC15.18■□□□□ 0.02
CPEB3Q8NE35 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 103.8 ms