Protein–RNA interactions for Protein: Q8NDG6

TDRD9, ATP-dependent RNA helicase TDRD9, humanhuman

Known RBP Predictions only

Length 1,382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TDRD9Q8NDG6 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC28.23■■■□□ 2.11
TDRD9Q8NDG6 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC28.23■■■□□ 2.11
TDRD9Q8NDG6 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC28.23■■■□□ 2.11
TDRD9Q8NDG6 RARRES2P9-201ENST00000565168 469 ntBASIC28.23■■■□□ 2.11
TDRD9Q8NDG6 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC28.23■■■□□ 2.11
TDRD9Q8NDG6 AC018529.1-201ENST00000613063 361 ntBASIC28.23■■■□□ 2.11
TDRD9Q8NDG6 AC007967.4-201ENST00000614700 386 ntBASIC28.23■■■□□ 2.11
TDRD9Q8NDG6 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC28.23■■■□□ 2.11
TDRD9Q8NDG6 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC28.23■■■□□ 2.11
TDRD9Q8NDG6 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC28.22■■■□□ 2.11
TDRD9Q8NDG6 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC28.22■■■□□ 2.11
TDRD9Q8NDG6 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
TDRD9Q8NDG6 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC28.22■■■□□ 2.11
TDRD9Q8NDG6 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC28.22■■■□□ 2.11
TDRD9Q8NDG6 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC28.22■■■□□ 2.11
TDRD9Q8NDG6 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
TDRD9Q8NDG6 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC28.22■■■□□ 2.11
TDRD9Q8NDG6 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC28.22■■■□□ 2.11
TDRD9Q8NDG6 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC28.22■■■□□ 2.11
TDRD9Q8NDG6 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC28.22■■■□□ 2.11
TDRD9Q8NDG6 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
TDRD9Q8NDG6 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
TDRD9Q8NDG6 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
TDRD9Q8NDG6 MIR1909-201ENST00000411312 80 ntBASIC28.22■■■□□ 2.11
TDRD9Q8NDG6 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC28.22■■■□□ 2.11
TDRD9Q8NDG6 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC28.22■■■□□ 2.11
TDRD9Q8NDG6 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC28.22■■■□□ 2.11
TDRD9Q8NDG6 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC28.22■■■□□ 2.11
TDRD9Q8NDG6 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC28.22■■■□□ 2.11
TDRD9Q8NDG6 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
TDRD9Q8NDG6 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC28.22■■■□□ 2.11
TDRD9Q8NDG6 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC28.22■■■□□ 2.11
TDRD9Q8NDG6 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
TDRD9Q8NDG6 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC28.22■■■□□ 2.11
TDRD9Q8NDG6 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC28.21■■■□□ 2.11
TDRD9Q8NDG6 NARF-206ENST00000457415 1668 ntTSL 5 BASIC28.21■■■□□ 2.11
TDRD9Q8NDG6 SLC22A20-204ENST00000530038 1673 ntBASIC28.21■■■□□ 2.11
TDRD9Q8NDG6 KRT18P55-202ENST00000578578 1546 ntBASIC28.21■■■□□ 2.11
TDRD9Q8NDG6 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC28.21■■■□□ 2.11
TDRD9Q8NDG6 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC28.21■■■□□ 2.11
TDRD9Q8NDG6 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC28.21■■■□□ 2.11
TDRD9Q8NDG6 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC28.21■■■□□ 2.11
TDRD9Q8NDG6 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC28.21■■■□□ 2.11
TDRD9Q8NDG6 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC28.21■■■□□ 2.11
TDRD9Q8NDG6 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC28.21■■■□□ 2.11
TDRD9Q8NDG6 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC28.21■■■□□ 2.11
TDRD9Q8NDG6 MTRF1LP2-201ENST00000506027 1122 ntBASIC28.21■■■□□ 2.11
TDRD9Q8NDG6 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC28.21■■■□□ 2.11
TDRD9Q8NDG6 AL844908.2-201ENST00000609461 460 ntBASIC28.21■■■□□ 2.11
TDRD9Q8NDG6 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.11
TDRD9Q8NDG6 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.11
TDRD9Q8NDG6 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC28.2■■■□□ 2.11
TDRD9Q8NDG6 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.11
TDRD9Q8NDG6 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC28.2■■■□□ 2.11
TDRD9Q8NDG6 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC28.2■■■□□ 2.11
TDRD9Q8NDG6 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.1
TDRD9Q8NDG6 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC28.2■■■□□ 2.1
TDRD9Q8NDG6 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.1
TDRD9Q8NDG6 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC28.2■■■□□ 2.1
TDRD9Q8NDG6 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC28.2■■■□□ 2.1
TDRD9Q8NDG6 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC28.2■■■□□ 2.1
TDRD9Q8NDG6 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.1
TDRD9Q8NDG6 HLA-V-204ENST00000476601 1289 ntBASIC28.2■■■□□ 2.1
TDRD9Q8NDG6 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC28.2■■■□□ 2.1
TDRD9Q8NDG6 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC28.2■■■□□ 2.1
TDRD9Q8NDG6 AC140912.1-201ENST00000577171 1054 ntBASIC28.2■■■□□ 2.1
TDRD9Q8NDG6 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC28.2■■■□□ 2.1
TDRD9Q8NDG6 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC28.2■■■□□ 2.1
TDRD9Q8NDG6 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC28.2■■■□□ 2.1
TDRD9Q8NDG6 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC28.2■■■□□ 2.1
TDRD9Q8NDG6 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC28.2■■■□□ 2.1
TDRD9Q8NDG6 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC28.2■■■□□ 2.1
TDRD9Q8NDG6 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC28.19■■■□□ 2.1
TDRD9Q8NDG6 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC28.19■■■□□ 2.1
TDRD9Q8NDG6 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC28.19■■■□□ 2.1
TDRD9Q8NDG6 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC28.19■■■□□ 2.1
TDRD9Q8NDG6 STK4-201ENST00000372801 2038 ntTSL 2 BASIC28.19■■■□□ 2.1
TDRD9Q8NDG6 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC28.19■■■□□ 2.1
TDRD9Q8NDG6 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC28.19■■■□□ 2.1
TDRD9Q8NDG6 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC28.19■■■□□ 2.1
TDRD9Q8NDG6 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC28.19■■■□□ 2.1
TDRD9Q8NDG6 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC28.19■■■□□ 2.1
TDRD9Q8NDG6 AC004840.1-201ENST00000636359 365 ntBASIC28.19■■■□□ 2.1
TDRD9Q8NDG6 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC28.19■■■□□ 2.1
TDRD9Q8NDG6 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC28.19■■■□□ 2.1
TDRD9Q8NDG6 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC28.19■■■□□ 2.1
TDRD9Q8NDG6 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC28.19■■■□□ 2.1
TDRD9Q8NDG6 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC28.19■■■□□ 2.1
TDRD9Q8NDG6 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
TDRD9Q8NDG6 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC28.18■■■□□ 2.1
TDRD9Q8NDG6 AL353732.1-201ENST00000569618 1459 ntBASIC28.18■■■□□ 2.1
TDRD9Q8NDG6 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC28.18■■■□□ 2.1
TDRD9Q8NDG6 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC28.18■■■□□ 2.1
TDRD9Q8NDG6 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
TDRD9Q8NDG6 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC28.18■■■□□ 2.1
TDRD9Q8NDG6 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC28.18■■■□□ 2.1
TDRD9Q8NDG6 INE1-201ENST00000456273 945 ntBASIC28.18■■■□□ 2.1
TDRD9Q8NDG6 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC28.18■■■□□ 2.1
TDRD9Q8NDG6 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC28.18■■■□□ 2.1
TDRD9Q8NDG6 MIR3909-201ENST00000579518 119 ntBASIC28.18■■■□□ 2.1
Retrieved 100 of 98,524 protein–RNA pairs in 59.6 ms