Protein–RNA interactions for Protein: Q8N967

LRTM2, Leucine-rich repeat and transmembrane domain-containing protein 2, humanhuman

Predictions only

Length 370 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM2Q8N967 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC14.18□□□□□ -0.14
LRTM2Q8N967 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC14.18□□□□□ -0.14
LRTM2Q8N967 EGLN1P1-201ENST00000531623 762 ntBASIC14.18□□□□□ -0.14
LRTM2Q8N967 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
LRTM2Q8N967 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC14.18□□□□□ -0.14
LRTM2Q8N967 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
LRTM2Q8N967 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC14.18□□□□□ -0.14
LRTM2Q8N967 ANKRD20A8P-203ENST00000641373 517 ntBASIC14.18□□□□□ -0.14
LRTM2Q8N967 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
LRTM2Q8N967 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC14.18□□□□□ -0.14
LRTM2Q8N967 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
LRTM2Q8N967 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
LRTM2Q8N967 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
LRTM2Q8N967 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
LRTM2Q8N967 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
LRTM2Q8N967 HLA-A-202ENST00000376806 1854 ntBASIC14.18□□□□□ -0.14
LRTM2Q8N967 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
LRTM2Q8N967 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
LRTM2Q8N967 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC14.18□□□□□ -0.14
LRTM2Q8N967 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
LRTM2Q8N967 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
LRTM2Q8N967 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
LRTM2Q8N967 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
LRTM2Q8N967 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
LRTM2Q8N967 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
LRTM2Q8N967 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC14.18□□□□□ -0.14
LRTM2Q8N967 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
LRTM2Q8N967 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
LRTM2Q8N967 MST1L-201ENST00000442552 2185 ntBASIC14.17□□□□□ -0.14
LRTM2Q8N967 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
LRTM2Q8N967 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
LRTM2Q8N967 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
LRTM2Q8N967 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC14.17□□□□□ -0.14
LRTM2Q8N967 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
LRTM2Q8N967 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
LRTM2Q8N967 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC14.17□□□□□ -0.14
LRTM2Q8N967 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
LRTM2Q8N967 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
LRTM2Q8N967 ENSA-206ENST00000361631 725 ntTSL 2 BASIC14.17□□□□□ -0.14
LRTM2Q8N967 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
LRTM2Q8N967 ID1-201ENST00000376105 1233 ntBASIC14.17□□□□□ -0.14
LRTM2Q8N967 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
LRTM2Q8N967 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
LRTM2Q8N967 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC14.17□□□□□ -0.14
LRTM2Q8N967 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
LRTM2Q8N967 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC14.17□□□□□ -0.14
LRTM2Q8N967 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC14.17□□□□□ -0.14
LRTM2Q8N967 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC14.17□□□□□ -0.14
LRTM2Q8N967 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC14.17□□□□□ -0.14
LRTM2Q8N967 AL365203.3-201ENST00000609742 2057 ntBASIC14.17□□□□□ -0.14
LRTM2Q8N967 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
LRTM2Q8N967 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC14.17□□□□□ -0.14
LRTM2Q8N967 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
LRTM2Q8N967 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC14.17□□□□□ -0.14
LRTM2Q8N967 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
LRTM2Q8N967 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
LRTM2Q8N967 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
LRTM2Q8N967 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC14.17□□□□□ -0.14
LRTM2Q8N967 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
LRTM2Q8N967 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
LRTM2Q8N967 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
LRTM2Q8N967 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC14.17□□□□□ -0.14
LRTM2Q8N967 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
LRTM2Q8N967 MTHFR-217ENST00000641820 1569 ntBASIC14.17□□□□□ -0.14
LRTM2Q8N967 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
LRTM2Q8N967 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
LRTM2Q8N967 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC14.17□□□□□ -0.14
LRTM2Q8N967 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
LRTM2Q8N967 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
LRTM2Q8N967 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC14.16□□□□□ -0.14
LRTM2Q8N967 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
LRTM2Q8N967 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
LRTM2Q8N967 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
LRTM2Q8N967 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
LRTM2Q8N967 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
LRTM2Q8N967 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
LRTM2Q8N967 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
LRTM2Q8N967 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC14.16□□□□□ -0.14
LRTM2Q8N967 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC14.16□□□□□ -0.14
LRTM2Q8N967 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
LRTM2Q8N967 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC14.16□□□□□ -0.14
LRTM2Q8N967 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC14.16□□□□□ -0.14
LRTM2Q8N967 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
LRTM2Q8N967 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
LRTM2Q8N967 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
LRTM2Q8N967 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC14.16□□□□□ -0.14
LRTM2Q8N967 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
LRTM2Q8N967 AC128688.1-201ENST00000487626 519 ntBASIC14.16□□□□□ -0.14
LRTM2Q8N967 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC14.16□□□□□ -0.14
LRTM2Q8N967 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC14.16□□□□□ -0.14
LRTM2Q8N967 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC14.16□□□□□ -0.14
LRTM2Q8N967 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC14.16□□□□□ -0.14
LRTM2Q8N967 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC14.16□□□□□ -0.14
LRTM2Q8N967 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
LRTM2Q8N967 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
LRTM2Q8N967 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC14.16□□□□□ -0.14
LRTM2Q8N967 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC14.16□□□□□ -0.14
LRTM2Q8N967 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
LRTM2Q8N967 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC14.16□□□□□ -0.14
LRTM2Q8N967 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms