Protein–RNA interactions for Protein: Q8N6Y1

PCDH20, Protocadherin-20, humanhuman

Known RBP Predictions only

Length 951 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH20Q8N6Y1 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
PCDH20Q8N6Y1 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC17.76■□□□□ 0.43
PCDH20Q8N6Y1 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
PCDH20Q8N6Y1 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC17.75■□□□□ 0.43
PCDH20Q8N6Y1 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
PCDH20Q8N6Y1 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
PCDH20Q8N6Y1 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC17.75■□□□□ 0.43
PCDH20Q8N6Y1 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
PCDH20Q8N6Y1 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PCDH20Q8N6Y1 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC17.75■□□□□ 0.43
PCDH20Q8N6Y1 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC17.75■□□□□ 0.43
PCDH20Q8N6Y1 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PCDH20Q8N6Y1 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
PCDH20Q8N6Y1 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
PCDH20Q8N6Y1 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PCDH20Q8N6Y1 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC17.75■□□□□ 0.43
PCDH20Q8N6Y1 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PCDH20Q8N6Y1 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
PCDH20Q8N6Y1 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
PCDH20Q8N6Y1 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PCDH20Q8N6Y1 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
PCDH20Q8N6Y1 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC17.75■□□□□ 0.43
PCDH20Q8N6Y1 SIGLEC30P-201ENST00000455569 941 ntBASIC17.75■□□□□ 0.43
PCDH20Q8N6Y1 AC093909.1-201ENST00000504731 1122 ntBASIC17.75■□□□□ 0.43
PCDH20Q8N6Y1 OR7E14P-202ENST00000530490 1290 ntBASIC17.75■□□□□ 0.43
PCDH20Q8N6Y1 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC17.75■□□□□ 0.43
PCDH20Q8N6Y1 RNF151-202ENST00000569210 853 ntTSL 2 BASIC17.75■□□□□ 0.43
PCDH20Q8N6Y1 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC17.75■□□□□ 0.43
PCDH20Q8N6Y1 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
PCDH20Q8N6Y1 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC17.75■□□□□ 0.43
PCDH20Q8N6Y1 FAM215A-202ENST00000632077 792 ntBASIC17.75■□□□□ 0.43
PCDH20Q8N6Y1 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
PCDH20Q8N6Y1 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
PCDH20Q8N6Y1 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PCDH20Q8N6Y1 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PCDH20Q8N6Y1 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
PCDH20Q8N6Y1 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
PCDH20Q8N6Y1 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
PCDH20Q8N6Y1 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PCDH20Q8N6Y1 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
PCDH20Q8N6Y1 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC17.74■□□□□ 0.43
PCDH20Q8N6Y1 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC17.74■□□□□ 0.43
PCDH20Q8N6Y1 AC012317.2-201ENST00000623305 2251 ntBASIC17.74■□□□□ 0.43
PCDH20Q8N6Y1 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
PCDH20Q8N6Y1 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
PCDH20Q8N6Y1 NME9-203ENST00000383180 2133 ntTSL 2 BASIC17.74■□□□□ 0.43
PCDH20Q8N6Y1 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
PCDH20Q8N6Y1 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC17.74■□□□□ 0.43
PCDH20Q8N6Y1 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
PCDH20Q8N6Y1 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PCDH20Q8N6Y1 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PCDH20Q8N6Y1 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
PCDH20Q8N6Y1 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC17.74■□□□□ 0.43
PCDH20Q8N6Y1 RPS2P1-201ENST00000434010 821 ntBASIC17.74■□□□□ 0.43
PCDH20Q8N6Y1 HNRNPDP1-201ENST00000439535 754 ntBASIC17.74■□□□□ 0.43
PCDH20Q8N6Y1 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC17.74■□□□□ 0.43
PCDH20Q8N6Y1 AC079776.4-201ENST00000511039 504 ntBASIC17.74■□□□□ 0.43
PCDH20Q8N6Y1 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PCDH20Q8N6Y1 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PCDH20Q8N6Y1 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PCDH20Q8N6Y1 AC080080.1-201ENST00000625121 2420 ntBASIC17.74■□□□□ 0.43
PCDH20Q8N6Y1 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
PCDH20Q8N6Y1 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PCDH20Q8N6Y1 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
PCDH20Q8N6Y1 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PCDH20Q8N6Y1 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC17.74■□□□□ 0.43
PCDH20Q8N6Y1 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC17.74■□□□□ 0.43
PCDH20Q8N6Y1 AC009336.1-201ENST00000608941 1553 ntBASIC17.74■□□□□ 0.43
PCDH20Q8N6Y1 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PCDH20Q8N6Y1 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
PCDH20Q8N6Y1 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
PCDH20Q8N6Y1 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
PCDH20Q8N6Y1 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC17.73■□□□□ 0.43
PCDH20Q8N6Y1 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC17.73■□□□□ 0.43
PCDH20Q8N6Y1 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PCDH20Q8N6Y1 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC17.73■□□□□ 0.43
PCDH20Q8N6Y1 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC17.73■□□□□ 0.43
PCDH20Q8N6Y1 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC17.73■□□□□ 0.43
PCDH20Q8N6Y1 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PCDH20Q8N6Y1 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
PCDH20Q8N6Y1 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PCDH20Q8N6Y1 LAGE3P1-201ENST00000425356 484 ntBASIC17.73■□□□□ 0.43
PCDH20Q8N6Y1 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC17.73■□□□□ 0.43
PCDH20Q8N6Y1 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC17.73■□□□□ 0.43
PCDH20Q8N6Y1 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
PCDH20Q8N6Y1 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC17.73■□□□□ 0.43
PCDH20Q8N6Y1 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
PCDH20Q8N6Y1 COPE-211ENST00000600932 1144 ntTSL 5 BASIC17.73■□□□□ 0.43
PCDH20Q8N6Y1 PRKN-208ENST00000610470 531 ntTSL 2 BASIC17.73■□□□□ 0.43
PCDH20Q8N6Y1 PRKN-209ENST00000612485 225 ntTSL 5 BASIC17.73■□□□□ 0.43
PCDH20Q8N6Y1 AC107918.4-202ENST00000641623 219 ntBASIC17.73■□□□□ 0.43
PCDH20Q8N6Y1 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
PCDH20Q8N6Y1 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
PCDH20Q8N6Y1 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
PCDH20Q8N6Y1 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PCDH20Q8N6Y1 AL645608.8-201ENST00000606034 2086 ntBASIC17.73■□□□□ 0.43
PCDH20Q8N6Y1 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
PCDH20Q8N6Y1 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PCDH20Q8N6Y1 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PCDH20Q8N6Y1 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms