Protein–RNA interactions for Protein: Q8N5V2

NGEF, Ephexin-1, humanhuman

Predictions only

Length 710 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NGEFQ8N5V2 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC22.8■■□□□ 1.24
NGEFQ8N5V2 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
NGEFQ8N5V2 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC22.79■■□□□ 1.24
NGEFQ8N5V2 EML3-212ENST00000494176 2901 ntTSL 2 BASIC22.79■■□□□ 1.24
NGEFQ8N5V2 EML3-216ENST00000529309 2909 ntTSL 2 BASIC22.79■■□□□ 1.24
NGEFQ8N5V2 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC22.79■■□□□ 1.24
NGEFQ8N5V2 GID4-202ENST00000376345 1391 ntTSL 3 BASIC22.79■■□□□ 1.24
NGEFQ8N5V2 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
NGEFQ8N5V2 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC22.79■■□□□ 1.24
NGEFQ8N5V2 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC22.79■■□□□ 1.24
NGEFQ8N5V2 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC22.79■■□□□ 1.24
NGEFQ8N5V2 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
NGEFQ8N5V2 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
NGEFQ8N5V2 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC22.79■■□□□ 1.24
NGEFQ8N5V2 RPL13AP23-201ENST00000480739 586 ntBASIC22.79■■□□□ 1.24
NGEFQ8N5V2 POLD2P1-201ENST00000511220 997 ntBASIC22.79■■□□□ 1.24
NGEFQ8N5V2 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
NGEFQ8N5V2 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC22.79■■□□□ 1.24
NGEFQ8N5V2 AC139887.3-201ENST00000568585 713 ntBASIC22.79■■□□□ 1.24
NGEFQ8N5V2 PRKN-208ENST00000610470 531 ntTSL 2 BASIC22.79■■□□□ 1.24
NGEFQ8N5V2 PRKN-209ENST00000612485 225 ntTSL 5 BASIC22.79■■□□□ 1.24
NGEFQ8N5V2 AL139288.1-201ENST00000623748 933 ntBASIC22.79■■□□□ 1.24
NGEFQ8N5V2 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
NGEFQ8N5V2 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC22.79■■□□□ 1.24
NGEFQ8N5V2 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
NGEFQ8N5V2 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
NGEFQ8N5V2 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
NGEFQ8N5V2 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
NGEFQ8N5V2 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC22.78■■□□□ 1.24
NGEFQ8N5V2 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
NGEFQ8N5V2 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
NGEFQ8N5V2 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
NGEFQ8N5V2 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
NGEFQ8N5V2 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC22.78■■□□□ 1.24
NGEFQ8N5V2 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC22.78■■□□□ 1.24
NGEFQ8N5V2 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC22.78■■□□□ 1.24
NGEFQ8N5V2 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC22.78■■□□□ 1.24
NGEFQ8N5V2 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC22.78■■□□□ 1.24
NGEFQ8N5V2 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC22.78■■□□□ 1.24
NGEFQ8N5V2 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
NGEFQ8N5V2 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
NGEFQ8N5V2 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
NGEFQ8N5V2 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
NGEFQ8N5V2 AC148477.5-201ENST00000625164 1645 ntBASIC22.78■■□□□ 1.24
NGEFQ8N5V2 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC22.78■■□□□ 1.24
NGEFQ8N5V2 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC22.78■■□□□ 1.24
NGEFQ8N5V2 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
NGEFQ8N5V2 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC22.77■■□□□ 1.24
NGEFQ8N5V2 AL356309.3-201ENST00000624132 1934 ntBASIC22.77■■□□□ 1.24
NGEFQ8N5V2 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
NGEFQ8N5V2 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC22.77■■□□□ 1.24
NGEFQ8N5V2 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC22.77■■□□□ 1.24
NGEFQ8N5V2 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC22.77■■□□□ 1.24
NGEFQ8N5V2 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
NGEFQ8N5V2 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
NGEFQ8N5V2 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC22.77■■□□□ 1.24
NGEFQ8N5V2 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC22.77■■□□□ 1.24
NGEFQ8N5V2 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC22.77■■□□□ 1.24
NGEFQ8N5V2 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC22.77■■□□□ 1.24
NGEFQ8N5V2 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
NGEFQ8N5V2 RPL18-209ENST00000550645 463 ntTSL 5 BASIC22.77■■□□□ 1.24
NGEFQ8N5V2 RPL18-214ENST00000552588 559 ntTSL 3 BASIC22.77■■□□□ 1.24
NGEFQ8N5V2 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
NGEFQ8N5V2 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
NGEFQ8N5V2 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC22.77■■□□□ 1.24
NGEFQ8N5V2 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
NGEFQ8N5V2 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC22.77■■□□□ 1.24
NGEFQ8N5V2 PRORSD1P-202ENST00000563365 2154 ntBASIC22.77■■□□□ 1.24
NGEFQ8N5V2 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.23
NGEFQ8N5V2 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
NGEFQ8N5V2 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC22.76■■□□□ 1.23
NGEFQ8N5V2 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC22.76■■□□□ 1.23
NGEFQ8N5V2 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC22.76■■□□□ 1.23
NGEFQ8N5V2 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC22.76■■□□□ 1.23
NGEFQ8N5V2 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
NGEFQ8N5V2 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC22.76■■□□□ 1.23
NGEFQ8N5V2 NKAPP1-205ENST00000585790 367 ntBASIC22.76■■□□□ 1.23
NGEFQ8N5V2 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC22.76■■□□□ 1.23
NGEFQ8N5V2 GPALPP1-207ENST00000611650 899 ntBASIC22.76■■□□□ 1.23
NGEFQ8N5V2 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
NGEFQ8N5V2 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
NGEFQ8N5V2 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
NGEFQ8N5V2 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC22.76■■□□□ 1.23
NGEFQ8N5V2 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
NGEFQ8N5V2 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC22.76■■□□□ 1.23
NGEFQ8N5V2 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
NGEFQ8N5V2 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
NGEFQ8N5V2 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC22.76■■□□□ 1.23
NGEFQ8N5V2 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
NGEFQ8N5V2 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC22.75■■□□□ 1.23
NGEFQ8N5V2 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC22.75■■□□□ 1.23
NGEFQ8N5V2 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
NGEFQ8N5V2 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC22.75■■□□□ 1.23
NGEFQ8N5V2 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC22.75■■□□□ 1.23
NGEFQ8N5V2 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC22.75■■□□□ 1.23
NGEFQ8N5V2 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
NGEFQ8N5V2 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
NGEFQ8N5V2 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC22.75■■□□□ 1.23
NGEFQ8N5V2 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC22.75■■□□□ 1.23
NGEFQ8N5V2 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms