Protein–RNA interactions for Protein: Q8N3P4

VPS8, Vacuolar protein sorting-associated protein 8 homolog, humanhuman

Predictions only

Length 1,428 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8Q8N3P4 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.9
VPS8Q8N3P4 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.9
VPS8Q8N3P4 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC26.89■■□□□ 1.9
VPS8Q8N3P4 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC26.89■■□□□ 1.9
VPS8Q8N3P4 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC26.89■■□□□ 1.9
VPS8Q8N3P4 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC26.89■■□□□ 1.89
VPS8Q8N3P4 KRT18P13-201ENST00000400056 1290 ntBASIC26.89■■□□□ 1.89
VPS8Q8N3P4 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC26.89■■□□□ 1.89
VPS8Q8N3P4 MMP17-203ENST00000535004 719 ntTSL 3 BASIC26.89■■□□□ 1.89
VPS8Q8N3P4 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC26.89■■□□□ 1.89
VPS8Q8N3P4 AC010327.4-202ENST00000591484 748 ntBASIC26.89■■□□□ 1.89
VPS8Q8N3P4 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC26.89■■□□□ 1.89
VPS8Q8N3P4 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC26.89■■□□□ 1.89
VPS8Q8N3P4 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.89
VPS8Q8N3P4 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.89
VPS8Q8N3P4 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC26.89■■□□□ 1.89
VPS8Q8N3P4 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
VPS8Q8N3P4 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC26.88■■□□□ 1.89
VPS8Q8N3P4 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC26.88■■□□□ 1.89
VPS8Q8N3P4 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC26.88■■□□□ 1.89
VPS8Q8N3P4 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
VPS8Q8N3P4 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC26.88■■□□□ 1.89
VPS8Q8N3P4 BANP-227ENST00000626016 2144 ntTSL 2 BASIC26.88■■□□□ 1.89
VPS8Q8N3P4 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
VPS8Q8N3P4 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
VPS8Q8N3P4 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC26.88■■□□□ 1.89
VPS8Q8N3P4 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC26.88■■□□□ 1.89
VPS8Q8N3P4 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC26.88■■□□□ 1.89
VPS8Q8N3P4 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC26.88■■□□□ 1.89
VPS8Q8N3P4 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC26.88■■□□□ 1.89
VPS8Q8N3P4 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC26.88■■□□□ 1.89
VPS8Q8N3P4 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC26.88■■□□□ 1.89
VPS8Q8N3P4 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
VPS8Q8N3P4 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
VPS8Q8N3P4 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
VPS8Q8N3P4 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC26.87■■□□□ 1.89
VPS8Q8N3P4 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
VPS8Q8N3P4 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC26.87■■□□□ 1.89
VPS8Q8N3P4 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
VPS8Q8N3P4 PCDHB18P-201ENST00000524813 2368 ntBASIC26.87■■□□□ 1.89
VPS8Q8N3P4 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC26.87■■□□□ 1.89
VPS8Q8N3P4 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC26.87■■□□□ 1.89
VPS8Q8N3P4 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC26.87■■□□□ 1.89
VPS8Q8N3P4 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC26.87■■□□□ 1.89
VPS8Q8N3P4 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC26.87■■□□□ 1.89
VPS8Q8N3P4 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC26.87■■□□□ 1.89
VPS8Q8N3P4 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC26.87■■□□□ 1.89
VPS8Q8N3P4 RPL28-209ENST00000560055 670 ntTSL 3 BASIC26.87■■□□□ 1.89
VPS8Q8N3P4 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC26.87■■□□□ 1.89
VPS8Q8N3P4 AC004877.2-201ENST00000623941 599 ntBASIC26.87■■□□□ 1.89
VPS8Q8N3P4 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC26.87■■□□□ 1.89
VPS8Q8N3P4 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC26.87■■□□□ 1.89
VPS8Q8N3P4 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
VPS8Q8N3P4 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
VPS8Q8N3P4 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
VPS8Q8N3P4 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC26.86■■□□□ 1.89
VPS8Q8N3P4 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC26.86■■□□□ 1.89
VPS8Q8N3P4 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC26.86■■□□□ 1.89
VPS8Q8N3P4 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
VPS8Q8N3P4 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC26.86■■□□□ 1.89
VPS8Q8N3P4 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC26.86■■□□□ 1.89
VPS8Q8N3P4 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC26.86■■□□□ 1.89
VPS8Q8N3P4 AC092865.5-201ENST00000545435 363 ntBASIC26.86■■□□□ 1.89
VPS8Q8N3P4 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC26.86■■□□□ 1.89
VPS8Q8N3P4 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
VPS8Q8N3P4 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC26.86■■□□□ 1.89
VPS8Q8N3P4 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC26.86■■□□□ 1.89
VPS8Q8N3P4 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
VPS8Q8N3P4 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC26.86■■□□□ 1.89
VPS8Q8N3P4 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC26.86■■□□□ 1.89
VPS8Q8N3P4 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC26.86■■□□□ 1.89
VPS8Q8N3P4 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
VPS8Q8N3P4 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
VPS8Q8N3P4 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC26.86■■□□□ 1.89
VPS8Q8N3P4 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC26.86■■□□□ 1.89
VPS8Q8N3P4 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
VPS8Q8N3P4 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC26.85■■□□□ 1.89
VPS8Q8N3P4 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC26.85■■□□□ 1.89
VPS8Q8N3P4 AL023806.1-201ENST00000603994 1649 ntBASIC26.85■■□□□ 1.89
VPS8Q8N3P4 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC26.85■■□□□ 1.89
VPS8Q8N3P4 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC26.85■■□□□ 1.89
VPS8Q8N3P4 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC26.85■■□□□ 1.89
VPS8Q8N3P4 RPSAP43-201ENST00000402237 625 ntBASIC26.85■■□□□ 1.89
VPS8Q8N3P4 FIS1-203ENST00000442303 631 ntTSL 3 BASIC26.85■■□□□ 1.89
VPS8Q8N3P4 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC26.85■■□□□ 1.89
VPS8Q8N3P4 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC26.85■■□□□ 1.89
VPS8Q8N3P4 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
VPS8Q8N3P4 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
VPS8Q8N3P4 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC26.85■■□□□ 1.89
VPS8Q8N3P4 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC26.85■■□□□ 1.89
VPS8Q8N3P4 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC26.85■■□□□ 1.89
VPS8Q8N3P4 SLC22A20-204ENST00000530038 1673 ntBASIC26.85■■□□□ 1.89
VPS8Q8N3P4 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC26.85■■□□□ 1.89
VPS8Q8N3P4 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC26.85■■□□□ 1.89
VPS8Q8N3P4 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
VPS8Q8N3P4 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC26.85■■□□□ 1.89
VPS8Q8N3P4 AC092053.1-201ENST00000605787 1936 ntBASIC26.85■■□□□ 1.89
VPS8Q8N3P4 BCAR1-209ENST00000546196 1340 ntBASIC26.85■■□□□ 1.89
VPS8Q8N3P4 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC26.84■■□□□ 1.89
VPS8Q8N3P4 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC26.84■■□□□ 1.89
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms