Protein–RNA interactions for Protein: Q8IXQ6

PARP9, Poly [ADP-ribose] polymerase 9, humanhuman

Predictions only

Length 854 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PARP9Q8IXQ6 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC17.64■□□□□ 0.41
PARP9Q8IXQ6 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
PARP9Q8IXQ6 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
PARP9Q8IXQ6 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PARP9Q8IXQ6 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
PARP9Q8IXQ6 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC17.64■□□□□ 0.41
PARP9Q8IXQ6 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PARP9Q8IXQ6 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
PARP9Q8IXQ6 AC105917.1-201ENST00000506637 2539 ntBASIC17.64■□□□□ 0.41
PARP9Q8IXQ6 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
PARP9Q8IXQ6 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC17.64■□□□□ 0.41
PARP9Q8IXQ6 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
PARP9Q8IXQ6 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
PARP9Q8IXQ6 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC17.63■□□□□ 0.41
PARP9Q8IXQ6 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
PARP9Q8IXQ6 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PARP9Q8IXQ6 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PARP9Q8IXQ6 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC17.63■□□□□ 0.41
PARP9Q8IXQ6 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
PARP9Q8IXQ6 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PARP9Q8IXQ6 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
PARP9Q8IXQ6 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
PARP9Q8IXQ6 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC17.63■□□□□ 0.41
PARP9Q8IXQ6 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC17.63■□□□□ 0.41
PARP9Q8IXQ6 KC6-207ENST00000600644 2311 ntTSL 3 BASIC17.63■□□□□ 0.41
PARP9Q8IXQ6 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PARP9Q8IXQ6 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
PARP9Q8IXQ6 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
PARP9Q8IXQ6 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC17.63■□□□□ 0.41
PARP9Q8IXQ6 HOMER2P1-201ENST00000455653 964 ntBASIC17.63■□□□□ 0.41
PARP9Q8IXQ6 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
PARP9Q8IXQ6 ETFA-216ENST00000560726 942 ntTSL 3 BASIC17.63■□□□□ 0.41
PARP9Q8IXQ6 AC009065.1-201ENST00000564055 1225 ntBASIC17.63■□□□□ 0.41
PARP9Q8IXQ6 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PARP9Q8IXQ6 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC17.63■□□□□ 0.41
PARP9Q8IXQ6 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC17.63■□□□□ 0.41
PARP9Q8IXQ6 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PARP9Q8IXQ6 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
PARP9Q8IXQ6 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PARP9Q8IXQ6 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PARP9Q8IXQ6 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
PARP9Q8IXQ6 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
PARP9Q8IXQ6 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PARP9Q8IXQ6 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PARP9Q8IXQ6 HOXB1-202ENST00000577092 1414 ntBASIC17.63■□□□□ 0.41
PARP9Q8IXQ6 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
PARP9Q8IXQ6 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PARP9Q8IXQ6 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
PARP9Q8IXQ6 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PARP9Q8IXQ6 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
PARP9Q8IXQ6 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
PARP9Q8IXQ6 KRT18P55-202ENST00000578578 1546 ntBASIC17.62■□□□□ 0.41
PARP9Q8IXQ6 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC17.62■□□□□ 0.41
PARP9Q8IXQ6 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
PARP9Q8IXQ6 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC17.62■□□□□ 0.41
PARP9Q8IXQ6 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
PARP9Q8IXQ6 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
PARP9Q8IXQ6 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
PARP9Q8IXQ6 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
PARP9Q8IXQ6 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
PARP9Q8IXQ6 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PARP9Q8IXQ6 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC17.62■□□□□ 0.41
PARP9Q8IXQ6 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PARP9Q8IXQ6 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
PARP9Q8IXQ6 MIR149-201ENST00000384879 89 ntBASIC17.62■□□□□ 0.41
PARP9Q8IXQ6 YIPF7-202ENST00000415895 1196 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
PARP9Q8IXQ6 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PARP9Q8IXQ6 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC17.62■□□□□ 0.41
PARP9Q8IXQ6 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC17.62■□□□□ 0.41
PARP9Q8IXQ6 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
PARP9Q8IXQ6 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC17.62■□□□□ 0.41
PARP9Q8IXQ6 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PARP9Q8IXQ6 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC17.62■□□□□ 0.41
PARP9Q8IXQ6 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC17.62■□□□□ 0.41
PARP9Q8IXQ6 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
PARP9Q8IXQ6 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC17.62■□□□□ 0.41
PARP9Q8IXQ6 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
PARP9Q8IXQ6 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC17.62■□□□□ 0.41
PARP9Q8IXQ6 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
PARP9Q8IXQ6 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
PARP9Q8IXQ6 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PARP9Q8IXQ6 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PARP9Q8IXQ6 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC17.62■□□□□ 0.41
PARP9Q8IXQ6 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
PARP9Q8IXQ6 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PARP9Q8IXQ6 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
PARP9Q8IXQ6 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC17.62■□□□□ 0.41
PARP9Q8IXQ6 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
PARP9Q8IXQ6 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PARP9Q8IXQ6 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
PARP9Q8IXQ6 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC17.62■□□□□ 0.41
PARP9Q8IXQ6 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PARP9Q8IXQ6 AL163051.1-201ENST00000569214 1512 ntBASIC17.62■□□□□ 0.41
PARP9Q8IXQ6 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PARP9Q8IXQ6 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
PARP9Q8IXQ6 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PARP9Q8IXQ6 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
PARP9Q8IXQ6 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
PARP9Q8IXQ6 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
PARP9Q8IXQ6 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 45.3 ms