Protein–RNA interactions for Protein: Q8IWF9

CCDC83, Coiled-coil domain-containing protein 83, humanhuman

Predictions only

Length 413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC83Q8IWF9 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CCDC83Q8IWF9 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
CCDC83Q8IWF9 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
CCDC83Q8IWF9 AC103564.2-201ENST00000432853 1299 ntBASIC20.4■□□□□ 0.86
CCDC83Q8IWF9 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC20.4■□□□□ 0.86
CCDC83Q8IWF9 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC20.4■□□□□ 0.86
CCDC83Q8IWF9 NME3-204ENST00000563498 920 ntTSL 2 BASIC20.4■□□□□ 0.86
CCDC83Q8IWF9 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
CCDC83Q8IWF9 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
CCDC83Q8IWF9 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CCDC83Q8IWF9 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
CCDC83Q8IWF9 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
CCDC83Q8IWF9 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
CCDC83Q8IWF9 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
CCDC83Q8IWF9 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
CCDC83Q8IWF9 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC20.39■□□□□ 0.86
CCDC83Q8IWF9 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC20.39■□□□□ 0.86
CCDC83Q8IWF9 FUT8-AS1-201ENST00000621019 1521 ntBASIC20.39■□□□□ 0.85
CCDC83Q8IWF9 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC20.39■□□□□ 0.85
CCDC83Q8IWF9 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
CCDC83Q8IWF9 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CCDC83Q8IWF9 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CCDC83Q8IWF9 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC20.39■□□□□ 0.85
CCDC83Q8IWF9 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC20.39■□□□□ 0.85
CCDC83Q8IWF9 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC20.39■□□□□ 0.85
CCDC83Q8IWF9 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CCDC83Q8IWF9 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
CCDC83Q8IWF9 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC20.39■□□□□ 0.85
CCDC83Q8IWF9 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC20.39■□□□□ 0.85
CCDC83Q8IWF9 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
CCDC83Q8IWF9 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CCDC83Q8IWF9 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CCDC83Q8IWF9 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
CCDC83Q8IWF9 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CCDC83Q8IWF9 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC20.39■□□□□ 0.85
CCDC83Q8IWF9 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CCDC83Q8IWF9 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC20.38■□□□□ 0.85
CCDC83Q8IWF9 AL353593.2-201ENST00000602529 1483 ntBASIC20.38■□□□□ 0.85
CCDC83Q8IWF9 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CCDC83Q8IWF9 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CCDC83Q8IWF9 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
CCDC83Q8IWF9 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CCDC83Q8IWF9 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC20.38■□□□□ 0.85
CCDC83Q8IWF9 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CCDC83Q8IWF9 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC20.38■□□□□ 0.85
CCDC83Q8IWF9 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CCDC83Q8IWF9 AC092068.3-201ENST00000587894 2016 ntBASIC20.38■□□□□ 0.85
CCDC83Q8IWF9 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC20.38■□□□□ 0.85
CCDC83Q8IWF9 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CCDC83Q8IWF9 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC20.38■□□□□ 0.85
CCDC83Q8IWF9 ABR-204ENST00000543210 1049 ntTSL 2 BASIC20.38■□□□□ 0.85
CCDC83Q8IWF9 ABR-217ENST00000572441 563 ntTSL 4 BASIC20.38■□□□□ 0.85
CCDC83Q8IWF9 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC20.38■□□□□ 0.85
CCDC83Q8IWF9 AC116407.4-201ENST00000623319 1061 ntBASIC20.38■□□□□ 0.85
CCDC83Q8IWF9 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CCDC83Q8IWF9 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC20.38■□□□□ 0.85
CCDC83Q8IWF9 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CCDC83Q8IWF9 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
CCDC83Q8IWF9 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
CCDC83Q8IWF9 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
CCDC83Q8IWF9 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CCDC83Q8IWF9 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CCDC83Q8IWF9 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CCDC83Q8IWF9 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CCDC83Q8IWF9 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CCDC83Q8IWF9 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC20.37■□□□□ 0.85
CCDC83Q8IWF9 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
CCDC83Q8IWF9 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CCDC83Q8IWF9 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC20.37■□□□□ 0.85
CCDC83Q8IWF9 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC20.37■□□□□ 0.85
CCDC83Q8IWF9 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
CCDC83Q8IWF9 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
CCDC83Q8IWF9 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CCDC83Q8IWF9 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
CCDC83Q8IWF9 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CCDC83Q8IWF9 KRT18P1-202ENST00000452408 1331 ntBASIC20.37■□□□□ 0.85
CCDC83Q8IWF9 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC20.37■□□□□ 0.85
CCDC83Q8IWF9 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
CCDC83Q8IWF9 ENSA-206ENST00000361631 725 ntTSL 2 BASIC20.37■□□□□ 0.85
CCDC83Q8IWF9 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CCDC83Q8IWF9 AP002383.4-201ENST00000442518 975 ntBASIC20.37■□□□□ 0.85
CCDC83Q8IWF9 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CCDC83Q8IWF9 AC009533.2-201ENST00000543664 586 ntBASIC20.37■□□□□ 0.85
CCDC83Q8IWF9 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC20.37■□□□□ 0.85
CCDC83Q8IWF9 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
CCDC83Q8IWF9 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CCDC83Q8IWF9 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CCDC83Q8IWF9 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC20.37■□□□□ 0.85
CCDC83Q8IWF9 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC20.37■□□□□ 0.85
CCDC83Q8IWF9 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC20.37■□□□□ 0.85
CCDC83Q8IWF9 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CCDC83Q8IWF9 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CCDC83Q8IWF9 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC20.37■□□□□ 0.85
CCDC83Q8IWF9 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC20.37■□□□□ 0.85
CCDC83Q8IWF9 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
CCDC83Q8IWF9 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CCDC83Q8IWF9 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
CCDC83Q8IWF9 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC20.36■□□□□ 0.85
CCDC83Q8IWF9 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC20.36■□□□□ 0.85
CCDC83Q8IWF9 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms