Protein–RNA interactions for Protein: Q8IV32

CCDC71, Coiled-coil domain-containing protein 71, humanhuman

Predicted RBP Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71Q8IV32 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CCDC71Q8IV32 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CCDC71Q8IV32 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC16.29■□□□□ 0.2
CCDC71Q8IV32 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
CCDC71Q8IV32 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CCDC71Q8IV32 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC16.29■□□□□ 0.2
CCDC71Q8IV32 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CCDC71Q8IV32 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC16.29■□□□□ 0.2
CCDC71Q8IV32 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CCDC71Q8IV32 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CCDC71Q8IV32 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CCDC71Q8IV32 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC16.29■□□□□ 0.2
CCDC71Q8IV32 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
CCDC71Q8IV32 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
CCDC71Q8IV32 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CCDC71Q8IV32 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CCDC71Q8IV32 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
CCDC71Q8IV32 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CCDC71Q8IV32 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC16.29■□□□□ 0.2
CCDC71Q8IV32 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC16.29■□□□□ 0.2
CCDC71Q8IV32 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC16.29■□□□□ 0.2
CCDC71Q8IV32 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CCDC71Q8IV32 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC16.29■□□□□ 0.2
CCDC71Q8IV32 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC16.29■□□□□ 0.2
CCDC71Q8IV32 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC16.29■□□□□ 0.2
CCDC71Q8IV32 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC16.29■□□□□ 0.2
CCDC71Q8IV32 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CCDC71Q8IV32 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC16.29■□□□□ 0.2
CCDC71Q8IV32 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC16.29■□□□□ 0.2
CCDC71Q8IV32 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CCDC71Q8IV32 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CCDC71Q8IV32 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CCDC71Q8IV32 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
CCDC71Q8IV32 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CCDC71Q8IV32 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
CCDC71Q8IV32 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CCDC71Q8IV32 ASL-204ENST00000395331 1538 ntTSL 5 BASIC16.29■□□□□ 0.2
CCDC71Q8IV32 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CCDC71Q8IV32 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CCDC71Q8IV32 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CCDC71Q8IV32 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
CCDC71Q8IV32 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
CCDC71Q8IV32 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CCDC71Q8IV32 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC16.28■□□□□ 0.2
CCDC71Q8IV32 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
CCDC71Q8IV32 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
CCDC71Q8IV32 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CCDC71Q8IV32 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CCDC71Q8IV32 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC16.28■□□□□ 0.2
CCDC71Q8IV32 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CCDC71Q8IV32 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CCDC71Q8IV32 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC16.28■□□□□ 0.2
CCDC71Q8IV32 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CCDC71Q8IV32 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
CCDC71Q8IV32 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
CCDC71Q8IV32 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CCDC71Q8IV32 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CCDC71Q8IV32 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
CCDC71Q8IV32 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CCDC71Q8IV32 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC16.28■□□□□ 0.2
CCDC71Q8IV32 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC16.28■□□□□ 0.2
CCDC71Q8IV32 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
CCDC71Q8IV32 IGHV3-47-201ENST00000425060 335 ntBASIC16.28■□□□□ 0.2
CCDC71Q8IV32 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
CCDC71Q8IV32 KRT16P4-201ENST00000453883 522 ntBASIC16.28■□□□□ 0.2
CCDC71Q8IV32 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC16.28■□□□□ 0.2
CCDC71Q8IV32 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC16.28■□□□□ 0.2
CCDC71Q8IV32 PPOX-214ENST00000535223 664 ntTSL 3 BASIC16.28■□□□□ 0.2
CCDC71Q8IV32 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CCDC71Q8IV32 BMF-207ENST00000559701 630 ntTSL 3 BASIC16.28■□□□□ 0.2
CCDC71Q8IV32 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC16.28■□□□□ 0.2
CCDC71Q8IV32 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC16.28■□□□□ 0.2
CCDC71Q8IV32 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
CCDC71Q8IV32 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC16.28■□□□□ 0.2
CCDC71Q8IV32 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC16.28■□□□□ 0.2
CCDC71Q8IV32 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC16.28■□□□□ 0.2
CCDC71Q8IV32 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC16.28■□□□□ 0.2
CCDC71Q8IV32 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CCDC71Q8IV32 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CCDC71Q8IV32 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CCDC71Q8IV32 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CCDC71Q8IV32 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CCDC71Q8IV32 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CCDC71Q8IV32 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CCDC71Q8IV32 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CCDC71Q8IV32 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC16.28■□□□□ 0.2
CCDC71Q8IV32 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CCDC71Q8IV32 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC16.28■□□□□ 0.2
CCDC71Q8IV32 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
CCDC71Q8IV32 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CCDC71Q8IV32 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC16.28■□□□□ 0.2
CCDC71Q8IV32 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CCDC71Q8IV32 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC16.28■□□□□ 0.2
CCDC71Q8IV32 AL353692.3-201ENST00000407031 1396 ntBASIC16.27■□□□□ 0.2
CCDC71Q8IV32 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC16.27■□□□□ 0.2
CCDC71Q8IV32 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
CCDC71Q8IV32 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CCDC71Q8IV32 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CCDC71Q8IV32 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC16.27■□□□□ 0.2
CCDC71Q8IV32 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms