Protein–RNA interactions for Protein: Q8IV13

CCNJL, Cyclin-J-like protein, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNJLQ8IV13 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CCNJLQ8IV13 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC17.81■□□□□ 0.44
CCNJLQ8IV13 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC17.81■□□□□ 0.44
CCNJLQ8IV13 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CCNJLQ8IV13 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC17.81■□□□□ 0.44
CCNJLQ8IV13 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
CCNJLQ8IV13 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
CCNJLQ8IV13 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC17.81■□□□□ 0.44
CCNJLQ8IV13 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CCNJLQ8IV13 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CCNJLQ8IV13 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CCNJLQ8IV13 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CCNJLQ8IV13 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CCNJLQ8IV13 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CCNJLQ8IV13 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC17.81■□□□□ 0.44
CCNJLQ8IV13 TSPY19P-201ENST00000418461 509 ntBASIC17.81■□□□□ 0.44
CCNJLQ8IV13 TSPY18P-201ENST00000441642 509 ntBASIC17.81■□□□□ 0.44
CCNJLQ8IV13 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC17.81■□□□□ 0.44
CCNJLQ8IV13 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CCNJLQ8IV13 AC002558.1-201ENST00000488906 803 ntBASIC17.81■□□□□ 0.44
CCNJLQ8IV13 AC104819.1-201ENST00000504587 486 ntBASIC17.81■□□□□ 0.44
CCNJLQ8IV13 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC17.81■□□□□ 0.44
CCNJLQ8IV13 TBCB-205ENST00000585746 875 ntTSL 3 BASIC17.81■□□□□ 0.44
CCNJLQ8IV13 AL732292.2-201ENST00000609649 430 ntBASIC17.81■□□□□ 0.44
CCNJLQ8IV13 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CCNJLQ8IV13 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
CCNJLQ8IV13 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CCNJLQ8IV13 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
CCNJLQ8IV13 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CCNJLQ8IV13 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC17.81■□□□□ 0.44
CCNJLQ8IV13 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CCNJLQ8IV13 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC17.81■□□□□ 0.44
CCNJLQ8IV13 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC17.81■□□□□ 0.44
CCNJLQ8IV13 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CCNJLQ8IV13 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CCNJLQ8IV13 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CCNJLQ8IV13 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
CCNJLQ8IV13 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC17.81■□□□□ 0.44
CCNJLQ8IV13 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC17.81■□□□□ 0.44
CCNJLQ8IV13 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CCNJLQ8IV13 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CCNJLQ8IV13 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CCNJLQ8IV13 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CCNJLQ8IV13 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
CCNJLQ8IV13 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
CCNJLQ8IV13 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
CCNJLQ8IV13 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CCNJLQ8IV13 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CCNJLQ8IV13 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC17.81■□□□□ 0.44
CCNJLQ8IV13 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CCNJLQ8IV13 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CCNJLQ8IV13 AL162727.3-201ENST00000635661 2787 ntBASIC17.8■□□□□ 0.44
CCNJLQ8IV13 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CCNJLQ8IV13 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
CCNJLQ8IV13 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
CCNJLQ8IV13 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CCNJLQ8IV13 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CCNJLQ8IV13 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC17.8■□□□□ 0.44
CCNJLQ8IV13 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
CCNJLQ8IV13 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC17.8■□□□□ 0.44
CCNJLQ8IV13 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CCNJLQ8IV13 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC17.8■□□□□ 0.44
CCNJLQ8IV13 FOSL1P1-201ENST00000511041 816 ntBASIC17.8■□□□□ 0.44
CCNJLQ8IV13 AC091304.2-201ENST00000564639 760 ntBASIC17.8■□□□□ 0.44
CCNJLQ8IV13 LINC01711-201ENST00000598340 967 ntBASIC17.8■□□□□ 0.44
CCNJLQ8IV13 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC17.8■□□□□ 0.44
CCNJLQ8IV13 AL139327.4-201ENST00000612362 153 ntBASIC17.8■□□□□ 0.44
CCNJLQ8IV13 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CCNJLQ8IV13 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
CCNJLQ8IV13 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
CCNJLQ8IV13 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CCNJLQ8IV13 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CCNJLQ8IV13 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC17.8■□□□□ 0.44
CCNJLQ8IV13 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC17.8■□□□□ 0.44
CCNJLQ8IV13 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC17.8■□□□□ 0.44
CCNJLQ8IV13 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
CCNJLQ8IV13 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
CCNJLQ8IV13 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
CCNJLQ8IV13 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
CCNJLQ8IV13 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CCNJLQ8IV13 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
CCNJLQ8IV13 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CCNJLQ8IV13 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
CCNJLQ8IV13 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC17.79■□□□□ 0.44
CCNJLQ8IV13 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CCNJLQ8IV13 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
CCNJLQ8IV13 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CCNJLQ8IV13 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
CCNJLQ8IV13 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CCNJLQ8IV13 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CCNJLQ8IV13 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC17.79■□□□□ 0.44
CCNJLQ8IV13 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC17.79■□□□□ 0.44
CCNJLQ8IV13 TBC1D3P5-201ENST00000579401 1545 ntBASIC17.79■□□□□ 0.44
CCNJLQ8IV13 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CCNJLQ8IV13 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
CCNJLQ8IV13 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CCNJLQ8IV13 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CCNJLQ8IV13 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CCNJLQ8IV13 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC17.79■□□□□ 0.44
CCNJLQ8IV13 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC17.79■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms