Protein–RNA interactions for Protein: Q86UQ8

NFE4, Transcription factor NF-E4, humanhuman

Predictions only

Length 179 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFE4Q86UQ8 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
NFE4Q86UQ8 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
NFE4Q86UQ8 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
NFE4Q86UQ8 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC12.49□□□□□ -0.41
NFE4Q86UQ8 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC12.49□□□□□ -0.41
NFE4Q86UQ8 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
NFE4Q86UQ8 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
NFE4Q86UQ8 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
NFE4Q86UQ8 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC12.49□□□□□ -0.41
NFE4Q86UQ8 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
NFE4Q86UQ8 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC12.49□□□□□ -0.41
NFE4Q86UQ8 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
NFE4Q86UQ8 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
NFE4Q86UQ8 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC12.49□□□□□ -0.41
NFE4Q86UQ8 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
NFE4Q86UQ8 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
NFE4Q86UQ8 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC12.49□□□□□ -0.41
NFE4Q86UQ8 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
NFE4Q86UQ8 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
NFE4Q86UQ8 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC12.49□□□□□ -0.41
NFE4Q86UQ8 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
NFE4Q86UQ8 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
NFE4Q86UQ8 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC12.49□□□□□ -0.41
NFE4Q86UQ8 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
NFE4Q86UQ8 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC12.49□□□□□ -0.41
NFE4Q86UQ8 PCED1CP-201ENST00000419887 785 ntBASIC12.49□□□□□ -0.41
NFE4Q86UQ8 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC12.49□□□□□ -0.41
NFE4Q86UQ8 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
NFE4Q86UQ8 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC12.49□□□□□ -0.41
NFE4Q86UQ8 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC12.49□□□□□ -0.41
NFE4Q86UQ8 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC12.49□□□□□ -0.41
NFE4Q86UQ8 AL358472.4-201ENST00000633140 710 ntBASIC12.49□□□□□ -0.41
NFE4Q86UQ8 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
NFE4Q86UQ8 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
NFE4Q86UQ8 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
NFE4Q86UQ8 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
NFE4Q86UQ8 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
NFE4Q86UQ8 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
NFE4Q86UQ8 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC12.49□□□□□ -0.41
NFE4Q86UQ8 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
NFE4Q86UQ8 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
NFE4Q86UQ8 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
NFE4Q86UQ8 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
NFE4Q86UQ8 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
NFE4Q86UQ8 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
NFE4Q86UQ8 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
NFE4Q86UQ8 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
NFE4Q86UQ8 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC12.48□□□□□ -0.41
NFE4Q86UQ8 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
NFE4Q86UQ8 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
NFE4Q86UQ8 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
NFE4Q86UQ8 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
NFE4Q86UQ8 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
NFE4Q86UQ8 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
NFE4Q86UQ8 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
NFE4Q86UQ8 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC12.48□□□□□ -0.41
NFE4Q86UQ8 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
NFE4Q86UQ8 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
NFE4Q86UQ8 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC12.48□□□□□ -0.41
NFE4Q86UQ8 PCDHB17P-201ENST00000539533 2393 ntBASIC12.48□□□□□ -0.41
NFE4Q86UQ8 KRT8P50-201ENST00000562022 1438 ntBASIC12.48□□□□□ -0.41
NFE4Q86UQ8 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
NFE4Q86UQ8 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
NFE4Q86UQ8 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
NFE4Q86UQ8 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC12.48□□□□□ -0.41
NFE4Q86UQ8 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
NFE4Q86UQ8 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
NFE4Q86UQ8 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
NFE4Q86UQ8 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC12.48□□□□□ -0.41
NFE4Q86UQ8 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
NFE4Q86UQ8 MIR564-202ENST00000385049 94 ntBASIC12.48□□□□□ -0.41
NFE4Q86UQ8 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC12.48□□□□□ -0.41
NFE4Q86UQ8 AGGF1P2-201ENST00000426656 2106 ntBASIC12.48□□□□□ -0.41
NFE4Q86UQ8 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
NFE4Q86UQ8 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
NFE4Q86UQ8 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC12.48□□□□□ -0.41
NFE4Q86UQ8 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
NFE4Q86UQ8 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC12.48□□□□□ -0.41
NFE4Q86UQ8 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC12.48□□□□□ -0.41
NFE4Q86UQ8 CLN6-214ENST00000636314 442 ntTSL 3 BASIC12.48□□□□□ -0.41
NFE4Q86UQ8 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC12.48□□□□□ -0.41
NFE4Q86UQ8 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
NFE4Q86UQ8 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
NFE4Q86UQ8 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
NFE4Q86UQ8 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC12.48□□□□□ -0.41
NFE4Q86UQ8 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
NFE4Q86UQ8 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC12.48□□□□□ -0.41
NFE4Q86UQ8 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
NFE4Q86UQ8 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC12.48□□□□□ -0.41
NFE4Q86UQ8 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
NFE4Q86UQ8 AC106886.4-201ENST00000623557 2502 ntBASIC12.48□□□□□ -0.41
NFE4Q86UQ8 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
NFE4Q86UQ8 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
NFE4Q86UQ8 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
NFE4Q86UQ8 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC12.48□□□□□ -0.41
NFE4Q86UQ8 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC12.48□□□□□ -0.41
NFE4Q86UQ8 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
NFE4Q86UQ8 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
NFE4Q86UQ8 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
NFE4Q86UQ8 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 42.5 ms