Protein–RNA interactions for Protein: Q71RC9

SMIM5, Small integral membrane protein 5, humanhuman

Predictions only

Length 77 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM5Q71RC9 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC21.71■■□□□ 1.07
SMIM5Q71RC9 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
SMIM5Q71RC9 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
SMIM5Q71RC9 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
SMIM5Q71RC9 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC21.7■■□□□ 1.07
SMIM5Q71RC9 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC21.7■■□□□ 1.07
SMIM5Q71RC9 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.07
SMIM5Q71RC9 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
SMIM5Q71RC9 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC21.7■■□□□ 1.06
SMIM5Q71RC9 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
SMIM5Q71RC9 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC21.7■■□□□ 1.06
SMIM5Q71RC9 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.06
SMIM5Q71RC9 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC21.7■■□□□ 1.06
SMIM5Q71RC9 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
SMIM5Q71RC9 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.06
SMIM5Q71RC9 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
SMIM5Q71RC9 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
SMIM5Q71RC9 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC21.7■■□□□ 1.06
SMIM5Q71RC9 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC21.7■■□□□ 1.06
SMIM5Q71RC9 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
SMIM5Q71RC9 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC21.7■■□□□ 1.06
SMIM5Q71RC9 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC21.7■■□□□ 1.06
SMIM5Q71RC9 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC21.7■■□□□ 1.06
SMIM5Q71RC9 TMPRSS11CP-201ENST00000453277 683 ntBASIC21.7■■□□□ 1.06
SMIM5Q71RC9 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC21.7■■□□□ 1.06
SMIM5Q71RC9 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
SMIM5Q71RC9 AC069120.2-201ENST00000524091 540 ntBASIC21.7■■□□□ 1.06
SMIM5Q71RC9 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC21.7■■□□□ 1.06
SMIM5Q71RC9 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC21.7■■□□□ 1.06
SMIM5Q71RC9 SSH2-211ENST00000590153 570 ntTSL 4 BASIC21.7■■□□□ 1.06
SMIM5Q71RC9 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
SMIM5Q71RC9 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC21.7■■□□□ 1.06
SMIM5Q71RC9 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
SMIM5Q71RC9 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
SMIM5Q71RC9 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
SMIM5Q71RC9 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC21.7■■□□□ 1.06
SMIM5Q71RC9 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC21.69■■□□□ 1.06
SMIM5Q71RC9 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
SMIM5Q71RC9 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
SMIM5Q71RC9 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC21.69■■□□□ 1.06
SMIM5Q71RC9 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC21.69■■□□□ 1.06
SMIM5Q71RC9 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC21.69■■□□□ 1.06
SMIM5Q71RC9 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
SMIM5Q71RC9 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
SMIM5Q71RC9 HLA-V-201ENST00000429037 534 ntBASIC21.69■■□□□ 1.06
SMIM5Q71RC9 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC21.69■■□□□ 1.06
SMIM5Q71RC9 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
SMIM5Q71RC9 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC21.69■■□□□ 1.06
SMIM5Q71RC9 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC21.69■■□□□ 1.06
SMIM5Q71RC9 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
SMIM5Q71RC9 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC21.69■■□□□ 1.06
SMIM5Q71RC9 AL009183.1-201ENST00000603760 355 ntBASIC21.69■■□□□ 1.06
SMIM5Q71RC9 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC21.69■■□□□ 1.06
SMIM5Q71RC9 AL158211.3-201ENST00000607385 239 ntBASIC21.69■■□□□ 1.06
SMIM5Q71RC9 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC21.69■■□□□ 1.06
SMIM5Q71RC9 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC21.69■■□□□ 1.06
SMIM5Q71RC9 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
SMIM5Q71RC9 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC21.69■■□□□ 1.06
SMIM5Q71RC9 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
SMIM5Q71RC9 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC21.69■■□□□ 1.06
SMIM5Q71RC9 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
SMIM5Q71RC9 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC21.69■■□□□ 1.06
SMIM5Q71RC9 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC21.68■■□□□ 1.06
SMIM5Q71RC9 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
SMIM5Q71RC9 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC21.68■■□□□ 1.06
SMIM5Q71RC9 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
SMIM5Q71RC9 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC21.68■■□□□ 1.06
SMIM5Q71RC9 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
SMIM5Q71RC9 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
SMIM5Q71RC9 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
SMIM5Q71RC9 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC21.68■■□□□ 1.06
SMIM5Q71RC9 NME2P1-201ENST00000426182 414 ntBASIC21.68■■□□□ 1.06
SMIM5Q71RC9 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC21.68■■□□□ 1.06
SMIM5Q71RC9 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
SMIM5Q71RC9 ALG1L8P-201ENST00000533887 760 ntBASIC21.68■■□□□ 1.06
SMIM5Q71RC9 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC21.68■■□□□ 1.06
SMIM5Q71RC9 SPDYE22P-201ENST00000582158 798 ntBASIC21.68■■□□□ 1.06
SMIM5Q71RC9 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
SMIM5Q71RC9 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
SMIM5Q71RC9 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC21.68■■□□□ 1.06
SMIM5Q71RC9 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC21.68■■□□□ 1.06
SMIM5Q71RC9 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC21.68■■□□□ 1.06
SMIM5Q71RC9 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
SMIM5Q71RC9 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC21.68■■□□□ 1.06
SMIM5Q71RC9 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
SMIM5Q71RC9 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC21.68■■□□□ 1.06
SMIM5Q71RC9 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
SMIM5Q71RC9 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC21.68■■□□□ 1.06
SMIM5Q71RC9 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC21.67■■□□□ 1.06
SMIM5Q71RC9 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC21.67■■□□□ 1.06
SMIM5Q71RC9 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC21.67■■□□□ 1.06
SMIM5Q71RC9 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC21.67■■□□□ 1.06
SMIM5Q71RC9 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
SMIM5Q71RC9 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
SMIM5Q71RC9 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC21.67■■□□□ 1.06
SMIM5Q71RC9 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC21.67■■□□□ 1.06
SMIM5Q71RC9 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
SMIM5Q71RC9 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC21.67■■□□□ 1.06
SMIM5Q71RC9 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC21.67■■□□□ 1.06
SMIM5Q71RC9 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC21.67■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms