Protein–RNA interactions for Protein: Q6W3E5

GDPD4, Glycerophosphodiester phosphodiesterase domain-containing protein 4, humanhuman

Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDPD4Q6W3E5 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
GDPD4Q6W3E5 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
GDPD4Q6W3E5 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
GDPD4Q6W3E5 OR6D1P-202ENST00000641007 5290 ntBASIC17.38■□□□□ 0.37
GDPD4Q6W3E5 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
GDPD4Q6W3E5 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
GDPD4Q6W3E5 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
GDPD4Q6W3E5 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
GDPD4Q6W3E5 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
GDPD4Q6W3E5 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
GDPD4Q6W3E5 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
GDPD4Q6W3E5 AC016396.2-201ENST00000562575 1417 ntBASIC17.38■□□□□ 0.37
GDPD4Q6W3E5 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
GDPD4Q6W3E5 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
GDPD4Q6W3E5 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
GDPD4Q6W3E5 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC17.37■□□□□ 0.37
GDPD4Q6W3E5 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC17.37■□□□□ 0.37
GDPD4Q6W3E5 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
GDPD4Q6W3E5 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
GDPD4Q6W3E5 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
GDPD4Q6W3E5 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
GDPD4Q6W3E5 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC17.37■□□□□ 0.37
GDPD4Q6W3E5 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
GDPD4Q6W3E5 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
GDPD4Q6W3E5 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
GDPD4Q6W3E5 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
GDPD4Q6W3E5 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC17.37■□□□□ 0.37
GDPD4Q6W3E5 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
GDPD4Q6W3E5 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC17.37■□□□□ 0.37
GDPD4Q6W3E5 TPR-209ENST00000613151 2478 ntTSL 5 BASIC17.37■□□□□ 0.37
GDPD4Q6W3E5 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
GDPD4Q6W3E5 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
GDPD4Q6W3E5 METTL26-205ENST00000397666 726 ntTSL 2 BASIC17.37■□□□□ 0.37
GDPD4Q6W3E5 LBH-204ENST00000406087 559 ntTSL 4 BASIC17.37■□□□□ 0.37
GDPD4Q6W3E5 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC17.37■□□□□ 0.37
GDPD4Q6W3E5 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
GDPD4Q6W3E5 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
GDPD4Q6W3E5 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC17.37■□□□□ 0.37
GDPD4Q6W3E5 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
GDPD4Q6W3E5 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC17.37■□□□□ 0.37
GDPD4Q6W3E5 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
GDPD4Q6W3E5 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC17.37■□□□□ 0.37
GDPD4Q6W3E5 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
GDPD4Q6W3E5 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
GDPD4Q6W3E5 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC17.37■□□□□ 0.37
GDPD4Q6W3E5 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
GDPD4Q6W3E5 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC17.37■□□□□ 0.37
GDPD4Q6W3E5 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
GDPD4Q6W3E5 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC17.37■□□□□ 0.37
GDPD4Q6W3E5 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
GDPD4Q6W3E5 FST-202ENST00000396947 2538 ntTSL 5 BASIC17.37■□□□□ 0.37
GDPD4Q6W3E5 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC17.37■□□□□ 0.37
GDPD4Q6W3E5 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
GDPD4Q6W3E5 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
GDPD4Q6W3E5 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
GDPD4Q6W3E5 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
GDPD4Q6W3E5 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
GDPD4Q6W3E5 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC17.36■□□□□ 0.37
GDPD4Q6W3E5 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
GDPD4Q6W3E5 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
GDPD4Q6W3E5 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
GDPD4Q6W3E5 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC17.36■□□□□ 0.37
GDPD4Q6W3E5 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
GDPD4Q6W3E5 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
GDPD4Q6W3E5 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC17.36■□□□□ 0.37
GDPD4Q6W3E5 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC17.36■□□□□ 0.37
GDPD4Q6W3E5 MIR940-201ENST00000401276 94 ntBASIC17.36■□□□□ 0.37
GDPD4Q6W3E5 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
GDPD4Q6W3E5 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC17.36■□□□□ 0.37
GDPD4Q6W3E5 AC108073.2-201ENST00000464002 357 ntBASIC17.36■□□□□ 0.37
GDPD4Q6W3E5 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
GDPD4Q6W3E5 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
GDPD4Q6W3E5 AC027601.4-201ENST00000611259 610 ntBASIC17.36■□□□□ 0.37
GDPD4Q6W3E5 GGTLC5P-201ENST00000617623 998 ntBASIC17.36■□□□□ 0.37
GDPD4Q6W3E5 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
GDPD4Q6W3E5 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
GDPD4Q6W3E5 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
GDPD4Q6W3E5 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
GDPD4Q6W3E5 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
GDPD4Q6W3E5 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
GDPD4Q6W3E5 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
GDPD4Q6W3E5 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
GDPD4Q6W3E5 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
GDPD4Q6W3E5 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC17.36■□□□□ 0.37
GDPD4Q6W3E5 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
GDPD4Q6W3E5 PI4KAP1-204ENST00000612579 1703 ntBASIC17.35■□□□□ 0.37
GDPD4Q6W3E5 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC17.35■□□□□ 0.37
GDPD4Q6W3E5 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
GDPD4Q6W3E5 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
GDPD4Q6W3E5 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC17.35■□□□□ 0.37
GDPD4Q6W3E5 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
GDPD4Q6W3E5 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
GDPD4Q6W3E5 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
GDPD4Q6W3E5 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC17.35■□□□□ 0.37
GDPD4Q6W3E5 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
GDPD4Q6W3E5 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC17.35■□□□□ 0.37
GDPD4Q6W3E5 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
GDPD4Q6W3E5 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
GDPD4Q6W3E5 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
GDPD4Q6W3E5 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms