Protein–RNA interactions for Protein: Q6P4E1

CASC4, Protein CASC4, humanhuman

Predictions only

Length 433 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4Q6P4E1 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC17.74■□□□□ 0.43
CASC4Q6P4E1 COX5BP2-201ENST00000392354 334 ntBASIC17.74■□□□□ 0.43
CASC4Q6P4E1 AC002558.1-201ENST00000488906 803 ntBASIC17.74■□□□□ 0.43
CASC4Q6P4E1 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
CASC4Q6P4E1 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
CASC4Q6P4E1 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC17.74■□□□□ 0.43
CASC4Q6P4E1 AC124864.1-201ENST00000623408 392 ntBASIC17.74■□□□□ 0.43
CASC4Q6P4E1 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
CASC4Q6P4E1 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC17.74■□□□□ 0.43
CASC4Q6P4E1 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
CASC4Q6P4E1 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
CASC4Q6P4E1 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CASC4Q6P4E1 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
CASC4Q6P4E1 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CASC4Q6P4E1 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
CASC4Q6P4E1 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC17.74■□□□□ 0.43
CASC4Q6P4E1 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CASC4Q6P4E1 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CASC4Q6P4E1 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CASC4Q6P4E1 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
CASC4Q6P4E1 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
CASC4Q6P4E1 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC17.73■□□□□ 0.43
CASC4Q6P4E1 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CASC4Q6P4E1 AC097374.2-201ENST00000618617 1306 ntBASIC17.73■□□□□ 0.43
CASC4Q6P4E1 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
CASC4Q6P4E1 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC17.73■□□□□ 0.43
CASC4Q6P4E1 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC17.73■□□□□ 0.43
CASC4Q6P4E1 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
CASC4Q6P4E1 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC17.73■□□□□ 0.43
CASC4Q6P4E1 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CASC4Q6P4E1 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CASC4Q6P4E1 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CASC4Q6P4E1 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
CASC4Q6P4E1 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC17.73■□□□□ 0.43
CASC4Q6P4E1 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CASC4Q6P4E1 TMPOP1-202ENST00000424642 1267 ntBASIC17.73■□□□□ 0.43
CASC4Q6P4E1 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC17.73■□□□□ 0.43
CASC4Q6P4E1 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC17.73■□□□□ 0.43
CASC4Q6P4E1 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC17.73■□□□□ 0.43
CASC4Q6P4E1 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CASC4Q6P4E1 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC17.73■□□□□ 0.43
CASC4Q6P4E1 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CASC4Q6P4E1 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CASC4Q6P4E1 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
CASC4Q6P4E1 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
CASC4Q6P4E1 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
CASC4Q6P4E1 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CASC4Q6P4E1 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC17.73■□□□□ 0.43
CASC4Q6P4E1 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CASC4Q6P4E1 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CASC4Q6P4E1 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CASC4Q6P4E1 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CASC4Q6P4E1 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CASC4Q6P4E1 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
CASC4Q6P4E1 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
CASC4Q6P4E1 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC17.72■□□□□ 0.43
CASC4Q6P4E1 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CASC4Q6P4E1 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC17.72■□□□□ 0.43
CASC4Q6P4E1 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CASC4Q6P4E1 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
CASC4Q6P4E1 ACE-204ENST00000428043 5120 ntTSL 2 BASIC17.72■□□□□ 0.43
CASC4Q6P4E1 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CASC4Q6P4E1 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CASC4Q6P4E1 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
CASC4Q6P4E1 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
CASC4Q6P4E1 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CASC4Q6P4E1 PKD1P5-201ENST00000532415 10291 ntBASIC17.72■□□□□ 0.43
CASC4Q6P4E1 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CASC4Q6P4E1 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CASC4Q6P4E1 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CASC4Q6P4E1 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
CASC4Q6P4E1 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC17.72■□□□□ 0.43
CASC4Q6P4E1 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CASC4Q6P4E1 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
CASC4Q6P4E1 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
CASC4Q6P4E1 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
CASC4Q6P4E1 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CASC4Q6P4E1 RCN1P1-201ENST00000400413 996 ntBASIC17.72■□□□□ 0.43
CASC4Q6P4E1 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CASC4Q6P4E1 PON3-205ENST00000451904 1053 ntTSL 3 BASIC17.72■□□□□ 0.43
CASC4Q6P4E1 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CASC4Q6P4E1 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC17.72■□□□□ 0.43
CASC4Q6P4E1 IGHV3-52-201ENST00000519770 353 ntBASIC17.72■□□□□ 0.43
CASC4Q6P4E1 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC17.72■□□□□ 0.43
CASC4Q6P4E1 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC17.72■□□□□ 0.43
CASC4Q6P4E1 IGHV3-41-201ENST00000613121 348 ntBASIC17.72■□□□□ 0.43
CASC4Q6P4E1 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CASC4Q6P4E1 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CASC4Q6P4E1 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CASC4Q6P4E1 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
CASC4Q6P4E1 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CASC4Q6P4E1 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC17.72■□□□□ 0.43
CASC4Q6P4E1 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CASC4Q6P4E1 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CASC4Q6P4E1 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CASC4Q6P4E1 AMT-250ENST00000637682 1823 ntTSL 5 BASIC17.72■□□□□ 0.43
CASC4Q6P4E1 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CASC4Q6P4E1 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
CASC4Q6P4E1 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CASC4Q6P4E1 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms