Protein–RNA interactions for Protein: Q6IN85

PPP4R3A, Serine/threonine-protein phosphatase 4 regulatory subunit 3A, humanhuman

Predictions only

Length 833 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3AQ6IN85 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PPP4R3AQ6IN85 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC19.72■□□□□ 0.75
PPP4R3AQ6IN85 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC19.72■□□□□ 0.75
PPP4R3AQ6IN85 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC19.72■□□□□ 0.75
PPP4R3AQ6IN85 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PPP4R3AQ6IN85 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
PPP4R3AQ6IN85 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC19.72■□□□□ 0.75
PPP4R3AQ6IN85 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC19.72■□□□□ 0.75
PPP4R3AQ6IN85 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC19.72■□□□□ 0.75
PPP4R3AQ6IN85 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC19.72■□□□□ 0.75
PPP4R3AQ6IN85 AL160237.2-201ENST00000556165 472 ntBASIC19.72■□□□□ 0.75
PPP4R3AQ6IN85 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC19.72■□□□□ 0.75
PPP4R3AQ6IN85 AC021087.4-201ENST00000563761 564 ntBASIC19.72■□□□□ 0.75
PPP4R3AQ6IN85 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC19.72■□□□□ 0.75
PPP4R3AQ6IN85 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC19.72■□□□□ 0.75
PPP4R3AQ6IN85 CALM3-211ENST00000598871 561 ntTSL 4 BASIC19.72■□□□□ 0.75
PPP4R3AQ6IN85 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
PPP4R3AQ6IN85 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PPP4R3AQ6IN85 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PPP4R3AQ6IN85 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
PPP4R3AQ6IN85 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PPP4R3AQ6IN85 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
PPP4R3AQ6IN85 CROCCP2-202ENST00000412962 2773 ntBASIC19.72■□□□□ 0.75
PPP4R3AQ6IN85 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC19.71■□□□□ 0.75
PPP4R3AQ6IN85 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PPP4R3AQ6IN85 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC19.71■□□□□ 0.75
PPP4R3AQ6IN85 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PPP4R3AQ6IN85 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
PPP4R3AQ6IN85 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
PPP4R3AQ6IN85 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC19.71■□□□□ 0.75
PPP4R3AQ6IN85 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
PPP4R3AQ6IN85 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC19.71■□□□□ 0.75
PPP4R3AQ6IN85 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC19.71■□□□□ 0.75
PPP4R3AQ6IN85 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC19.71■□□□□ 0.75
PPP4R3AQ6IN85 FZD10-202ENST00000539839 3282 ntBASIC19.71■□□□□ 0.75
PPP4R3AQ6IN85 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
PPP4R3AQ6IN85 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC19.71■□□□□ 0.75
PPP4R3AQ6IN85 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
PPP4R3AQ6IN85 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PPP4R3AQ6IN85 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
PPP4R3AQ6IN85 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC19.71■□□□□ 0.75
PPP4R3AQ6IN85 S100A2-206ENST00000497140 697 ntTSL 2 BASIC19.71■□□□□ 0.75
PPP4R3AQ6IN85 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC19.71■□□□□ 0.75
PPP4R3AQ6IN85 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC19.71■□□□□ 0.75
PPP4R3AQ6IN85 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC19.71■□□□□ 0.75
PPP4R3AQ6IN85 PAM16-208ENST00000573553 722 ntTSL 2 BASIC19.71■□□□□ 0.75
PPP4R3AQ6IN85 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC19.71■□□□□ 0.75
PPP4R3AQ6IN85 MTDHP4-201ENST00000600287 670 ntBASIC19.71■□□□□ 0.75
PPP4R3AQ6IN85 AC025062.2-201ENST00000605477 670 ntBASIC19.71■□□□□ 0.75
PPP4R3AQ6IN85 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
PPP4R3AQ6IN85 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PPP4R3AQ6IN85 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
PPP4R3AQ6IN85 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
PPP4R3AQ6IN85 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC19.71■□□□□ 0.75
PPP4R3AQ6IN85 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC19.71■□□□□ 0.75
PPP4R3AQ6IN85 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC19.71■□□□□ 0.75
PPP4R3AQ6IN85 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PPP4R3AQ6IN85 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PPP4R3AQ6IN85 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
PPP4R3AQ6IN85 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PPP4R3AQ6IN85 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.74
PPP4R3AQ6IN85 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC19.7■□□□□ 0.74
PPP4R3AQ6IN85 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
PPP4R3AQ6IN85 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC19.7■□□□□ 0.74
PPP4R3AQ6IN85 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PPP4R3AQ6IN85 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
PPP4R3AQ6IN85 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC19.7■□□□□ 0.74
PPP4R3AQ6IN85 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PPP4R3AQ6IN85 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
PPP4R3AQ6IN85 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
PPP4R3AQ6IN85 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
PPP4R3AQ6IN85 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
PPP4R3AQ6IN85 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
PPP4R3AQ6IN85 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC19.7■□□□□ 0.74
PPP4R3AQ6IN85 ACTG1P4-201ENST00000425123 1122 ntBASIC19.7■□□□□ 0.74
PPP4R3AQ6IN85 FAM197Y8-203ENST00000450145 560 ntBASIC19.7■□□□□ 0.74
PPP4R3AQ6IN85 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC19.7■□□□□ 0.74
PPP4R3AQ6IN85 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC19.7■□□□□ 0.74
PPP4R3AQ6IN85 AP002469.2-201ENST00000531724 424 ntBASIC19.7■□□□□ 0.74
PPP4R3AQ6IN85 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC19.7■□□□□ 0.74
PPP4R3AQ6IN85 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC19.7■□□□□ 0.74
PPP4R3AQ6IN85 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC19.7■□□□□ 0.74
PPP4R3AQ6IN85 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC19.7■□□□□ 0.74
PPP4R3AQ6IN85 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
PPP4R3AQ6IN85 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PPP4R3AQ6IN85 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC19.7■□□□□ 0.74
PPP4R3AQ6IN85 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
PPP4R3AQ6IN85 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
PPP4R3AQ6IN85 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
PPP4R3AQ6IN85 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC19.7■□□□□ 0.74
PPP4R3AQ6IN85 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC19.7■□□□□ 0.74
PPP4R3AQ6IN85 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PPP4R3AQ6IN85 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
PPP4R3AQ6IN85 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
PPP4R3AQ6IN85 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PPP4R3AQ6IN85 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
PPP4R3AQ6IN85 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC19.7■□□□□ 0.74
PPP4R3AQ6IN85 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PPP4R3AQ6IN85 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PPP4R3AQ6IN85 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 57.3 ms