Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
VARS2Q5ST30 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
VARS2Q5ST30 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC18.34■□□□□ 0.53
VARS2Q5ST30 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
VARS2Q5ST30 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.53
VARS2Q5ST30 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
VARS2Q5ST30 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.53
VARS2Q5ST30 PC-214ENST00000628663 1470 ntTSL 5 BASIC18.33■□□□□ 0.53
VARS2Q5ST30 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC18.33■□□□□ 0.53
VARS2Q5ST30 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC18.33■□□□□ 0.53
VARS2Q5ST30 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC18.33■□□□□ 0.53
VARS2Q5ST30 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
VARS2Q5ST30 BCAR1-209ENST00000546196 1340 ntBASIC18.33■□□□□ 0.53
VARS2Q5ST30 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.52
VARS2Q5ST30 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
VARS2Q5ST30 AC211486.1-202ENST00000416371 468 ntBASIC18.33■□□□□ 0.52
VARS2Q5ST30 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC18.33■□□□□ 0.52
VARS2Q5ST30 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
VARS2Q5ST30 AC211476.1-201ENST00000503899 468 ntBASIC18.33■□□□□ 0.52
VARS2Q5ST30 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC18.33■□□□□ 0.52
VARS2Q5ST30 AC005829.1-201ENST00000570002 483 ntBASIC18.33■□□□□ 0.52
VARS2Q5ST30 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC18.33■□□□□ 0.52
VARS2Q5ST30 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC18.33■□□□□ 0.52
VARS2Q5ST30 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
VARS2Q5ST30 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
VARS2Q5ST30 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
VARS2Q5ST30 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
VARS2Q5ST30 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
VARS2Q5ST30 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC18.33■□□□□ 0.52
VARS2Q5ST30 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
VARS2Q5ST30 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
VARS2Q5ST30 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
VARS2Q5ST30 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
VARS2Q5ST30 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
VARS2Q5ST30 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC18.33■□□□□ 0.52
VARS2Q5ST30 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
VARS2Q5ST30 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
VARS2Q5ST30 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC18.33■□□□□ 0.52
VARS2Q5ST30 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC18.33■□□□□ 0.52
VARS2Q5ST30 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
VARS2Q5ST30 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
VARS2Q5ST30 AL390961.4-201ENST00000623958 2535 ntBASIC18.32■□□□□ 0.52
VARS2Q5ST30 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
VARS2Q5ST30 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
VARS2Q5ST30 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC18.32■□□□□ 0.52
VARS2Q5ST30 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
VARS2Q5ST30 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC18.32■□□□□ 0.52
VARS2Q5ST30 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
VARS2Q5ST30 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC18.32■□□□□ 0.52
VARS2Q5ST30 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
VARS2Q5ST30 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC18.32■□□□□ 0.52
VARS2Q5ST30 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
VARS2Q5ST30 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC18.32■□□□□ 0.52
VARS2Q5ST30 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC18.32■□□□□ 0.52
VARS2Q5ST30 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
VARS2Q5ST30 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
VARS2Q5ST30 PAWRP1-201ENST00000451083 565 ntBASIC18.32■□□□□ 0.52
VARS2Q5ST30 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC18.32■□□□□ 0.52
VARS2Q5ST30 KRT19P2-202ENST00000557173 1012 ntBASIC18.32■□□□□ 0.52
VARS2Q5ST30 PDPK2P-202ENST00000562415 1191 ntBASIC18.32■□□□□ 0.52
VARS2Q5ST30 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC18.32■□□□□ 0.52
VARS2Q5ST30 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC18.32■□□□□ 0.52
VARS2Q5ST30 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC18.32■□□□□ 0.52
VARS2Q5ST30 C20orf181-201ENST00000623918 480 ntBASIC18.32■□□□□ 0.52
VARS2Q5ST30 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
VARS2Q5ST30 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
VARS2Q5ST30 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
VARS2Q5ST30 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
VARS2Q5ST30 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
VARS2Q5ST30 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
VARS2Q5ST30 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC18.31■□□□□ 0.52
VARS2Q5ST30 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
VARS2Q5ST30 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
VARS2Q5ST30 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC18.31■□□□□ 0.52
VARS2Q5ST30 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
VARS2Q5ST30 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
VARS2Q5ST30 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
VARS2Q5ST30 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
VARS2Q5ST30 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC18.31■□□□□ 0.52
VARS2Q5ST30 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC18.31■□□□□ 0.52
VARS2Q5ST30 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC18.31■□□□□ 0.52
VARS2Q5ST30 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC18.31■□□□□ 0.52
VARS2Q5ST30 AC019209.2-201ENST00000545704 373 ntTSL 3 BASIC18.31■□□□□ 0.52
VARS2Q5ST30 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC18.31■□□□□ 0.52
VARS2Q5ST30 AC005786.4-201ENST00000623369 682 ntBASIC18.31■□□□□ 0.52
VARS2Q5ST30 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
VARS2Q5ST30 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
VARS2Q5ST30 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
VARS2Q5ST30 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
VARS2Q5ST30 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC18.31■□□□□ 0.52
VARS2Q5ST30 AC133963.1-201ENST00000504166 1679 ntBASIC18.31■□□□□ 0.52
VARS2Q5ST30 AC025580.3-201ENST00000617932 1424 ntBASIC18.31■□□□□ 0.52
VARS2Q5ST30 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
VARS2Q5ST30 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC18.31■□□□□ 0.52
VARS2Q5ST30 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
VARS2Q5ST30 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
VARS2Q5ST30 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
VARS2Q5ST30 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.52
VARS2Q5ST30 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
VARS2Q5ST30 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms