Protein–RNA interactions for Protein: Q4VC31

CCDC58, Coiled-coil domain-containing protein 58, humanhuman

Predictions only

Length 144 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58Q4VC31 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
CCDC58Q4VC31 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CCDC58Q4VC31 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
CCDC58Q4VC31 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CCDC58Q4VC31 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC15.57■□□□□ 0.08
CCDC58Q4VC31 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
CCDC58Q4VC31 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
CCDC58Q4VC31 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CCDC58Q4VC31 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC15.57■□□□□ 0.08
CCDC58Q4VC31 AC128688.1-201ENST00000487626 519 ntBASIC15.57■□□□□ 0.08
CCDC58Q4VC31 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC15.57■□□□□ 0.08
CCDC58Q4VC31 EGLN1P1-201ENST00000531623 762 ntBASIC15.57■□□□□ 0.08
CCDC58Q4VC31 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CCDC58Q4VC31 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CCDC58Q4VC31 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CCDC58Q4VC31 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
CCDC58Q4VC31 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
CCDC58Q4VC31 LINC01311-201ENST00000565162 1445 ntBASIC15.57■□□□□ 0.08
CCDC58Q4VC31 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
CCDC58Q4VC31 TRIM45-201ENST00000256649 3515 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CCDC58Q4VC31 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC15.57■□□□□ 0.08
CCDC58Q4VC31 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC15.57■□□□□ 0.08
CCDC58Q4VC31 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CCDC58Q4VC31 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CCDC58Q4VC31 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC15.57■□□□□ 0.08
CCDC58Q4VC31 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CCDC58Q4VC31 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CCDC58Q4VC31 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CCDC58Q4VC31 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC15.57■□□□□ 0.08
CCDC58Q4VC31 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CCDC58Q4VC31 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
CCDC58Q4VC31 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CCDC58Q4VC31 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC15.56■□□□□ 0.08
CCDC58Q4VC31 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC15.56■□□□□ 0.08
CCDC58Q4VC31 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC15.56■□□□□ 0.08
CCDC58Q4VC31 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC15.56■□□□□ 0.08
CCDC58Q4VC31 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CCDC58Q4VC31 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CCDC58Q4VC31 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CCDC58Q4VC31 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CCDC58Q4VC31 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CCDC58Q4VC31 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CCDC58Q4VC31 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CCDC58Q4VC31 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC15.56■□□□□ 0.08
CCDC58Q4VC31 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CCDC58Q4VC31 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC15.56■□□□□ 0.08
CCDC58Q4VC31 AC009947.2-201ENST00000444014 672 ntBASIC15.56■□□□□ 0.08
CCDC58Q4VC31 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC15.56■□□□□ 0.08
CCDC58Q4VC31 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC15.56■□□□□ 0.08
CCDC58Q4VC31 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC15.56■□□□□ 0.08
CCDC58Q4VC31 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC15.56■□□□□ 0.08
CCDC58Q4VC31 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC15.56■□□□□ 0.08
CCDC58Q4VC31 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
CCDC58Q4VC31 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC15.56■□□□□ 0.08
CCDC58Q4VC31 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CCDC58Q4VC31 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
CCDC58Q4VC31 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
CCDC58Q4VC31 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CCDC58Q4VC31 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CCDC58Q4VC31 RHBDF1P1-201ENST00000427504 1941 ntBASIC15.56■□□□□ 0.08
CCDC58Q4VC31 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC15.56■□□□□ 0.08
CCDC58Q4VC31 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
CCDC58Q4VC31 PCDHA14-201ENST00000506751 2298 ntBASIC15.56■□□□□ 0.08
CCDC58Q4VC31 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CCDC58Q4VC31 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
CCDC58Q4VC31 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
CCDC58Q4VC31 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CCDC58Q4VC31 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC15.55■□□□□ 0.08
CCDC58Q4VC31 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
CCDC58Q4VC31 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CCDC58Q4VC31 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CCDC58Q4VC31 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CCDC58Q4VC31 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CCDC58Q4VC31 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CCDC58Q4VC31 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC15.55■□□□□ 0.08
CCDC58Q4VC31 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CCDC58Q4VC31 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC15.55■□□□□ 0.08
CCDC58Q4VC31 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC15.55■□□□□ 0.08
CCDC58Q4VC31 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CCDC58Q4VC31 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
CCDC58Q4VC31 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CCDC58Q4VC31 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC15.55■□□□□ 0.08
CCDC58Q4VC31 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC15.55■□□□□ 0.08
CCDC58Q4VC31 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC15.55■□□□□ 0.08
CCDC58Q4VC31 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC15.55■□□□□ 0.08
CCDC58Q4VC31 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC15.55■□□□□ 0.08
CCDC58Q4VC31 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC15.55■□□□□ 0.08
CCDC58Q4VC31 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC15.55■□□□□ 0.08
CCDC58Q4VC31 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC15.55■□□□□ 0.08
CCDC58Q4VC31 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC15.55■□□□□ 0.08
CCDC58Q4VC31 NT5C-210ENST00000582160 860 ntTSL 2 BASIC15.55■□□□□ 0.08
CCDC58Q4VC31 AP000525.1-201ENST00000608286 694 ntBASIC15.55■□□□□ 0.08
CCDC58Q4VC31 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CCDC58Q4VC31 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
CCDC58Q4VC31 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
CCDC58Q4VC31 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CCDC58Q4VC31 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CCDC58Q4VC31 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC15.55■□□□□ 0.08
CCDC58Q4VC31 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CCDC58Q4VC31 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 60.4 ms