Protein–RNA interactions for Protein: P55285

CDH6, Cadherin-6, humanhuman

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH6P55285 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CDH6P55285 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CDH6P55285 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CDH6P55285 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CDH6P55285 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
CDH6P55285 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC18.07■□□□□ 0.48
CDH6P55285 KLF4P1-201ENST00000412782 1185 ntBASIC18.07■□□□□ 0.48
CDH6P55285 POM121L3P-201ENST00000419331 1163 ntBASIC18.07■□□□□ 0.48
CDH6P55285 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
CDH6P55285 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
CDH6P55285 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CDH6P55285 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC18.07■□□□□ 0.48
CDH6P55285 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC18.07■□□□□ 0.48
CDH6P55285 AC073592.5-201ENST00000624854 528 ntBASIC18.07■□□□□ 0.48
CDH6P55285 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC18.07■□□□□ 0.48
CDH6P55285 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC18.07■□□□□ 0.48
CDH6P55285 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC18.07■□□□□ 0.48
CDH6P55285 RHBDF1P1-201ENST00000427504 1941 ntBASIC18.07■□□□□ 0.48
CDH6P55285 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC18.07■□□□□ 0.48
CDH6P55285 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC18.07■□□□□ 0.48
CDH6P55285 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC18.07■□□□□ 0.48
CDH6P55285 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CDH6P55285 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC18.07■□□□□ 0.48
CDH6P55285 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
CDH6P55285 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC18.07■□□□□ 0.48
CDH6P55285 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CDH6P55285 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC18.06■□□□□ 0.48
CDH6P55285 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CDH6P55285 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
CDH6P55285 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC18.06■□□□□ 0.48
CDH6P55285 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CDH6P55285 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
CDH6P55285 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CDH6P55285 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
CDH6P55285 AD000864.1-201ENST00000624076 2295 ntBASIC18.06■□□□□ 0.48
CDH6P55285 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CDH6P55285 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
CDH6P55285 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CDH6P55285 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CDH6P55285 AC003669.1-201ENST00000334569 611 ntBASIC18.06■□□□□ 0.48
CDH6P55285 FUOM-202ENST00000368551 628 ntTSL 3 BASIC18.06■□□□□ 0.48
CDH6P55285 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CDH6P55285 SLC25A1P3-201ENST00000395415 828 ntBASIC18.06■□□□□ 0.48
CDH6P55285 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CDH6P55285 THAP5-204ENST00000438865 868 ntTSL 2 BASIC18.06■□□□□ 0.48
CDH6P55285 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC18.06■□□□□ 0.48
CDH6P55285 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC18.06■□□□□ 0.48
CDH6P55285 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC18.06■□□□□ 0.48
CDH6P55285 PNN-202ENST00000553331 656 ntTSL 3 BASIC18.06■□□□□ 0.48
CDH6P55285 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC18.06■□□□□ 0.48
CDH6P55285 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CDH6P55285 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CDH6P55285 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
CDH6P55285 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC18.06■□□□□ 0.48
CDH6P55285 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CDH6P55285 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
CDH6P55285 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
CDH6P55285 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CDH6P55285 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
CDH6P55285 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CDH6P55285 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
CDH6P55285 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CDH6P55285 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
CDH6P55285 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CDH6P55285 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC18.06■□□□□ 0.48
CDH6P55285 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC18.06■□□□□ 0.48
CDH6P55285 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
CDH6P55285 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CDH6P55285 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CDH6P55285 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CDH6P55285 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CDH6P55285 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
CDH6P55285 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CDH6P55285 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC18.05■□□□□ 0.48
CDH6P55285 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CDH6P55285 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
CDH6P55285 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC18.05■□□□□ 0.48
CDH6P55285 NUS1P2-201ENST00000417358 873 ntBASIC18.05■□□□□ 0.48
CDH6P55285 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC18.05■□□□□ 0.48
CDH6P55285 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC18.05■□□□□ 0.48
CDH6P55285 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC18.05■□□□□ 0.48
CDH6P55285 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CDH6P55285 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC18.05■□□□□ 0.48
CDH6P55285 CCNC-219ENST00000627680 896 ntTSL 5 BASIC18.05■□□□□ 0.48
CDH6P55285 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC18.05■□□□□ 0.48
CDH6P55285 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CDH6P55285 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
CDH6P55285 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CDH6P55285 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CDH6P55285 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
CDH6P55285 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CDH6P55285 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC18.05■□□□□ 0.48
CDH6P55285 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CDH6P55285 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
CDH6P55285 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CDH6P55285 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CDH6P55285 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC18.05■□□□□ 0.48
CDH6P55285 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC18.05■□□□□ 0.48
CDH6P55285 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC18.05■□□□□ 0.48
CDH6P55285 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms