Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC16.87■□□□□ 0.29
PDX1P52945 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC16.87■□□□□ 0.29
PDX1P52945 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC16.87■□□□□ 0.29
PDX1P52945 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
PDX1P52945 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC16.87■□□□□ 0.29
PDX1P52945 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
PDX1P52945 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
PDX1P52945 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC16.87■□□□□ 0.29
PDX1P52945 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PDX1P52945 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PDX1P52945 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC16.87■□□□□ 0.29
PDX1P52945 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PDX1P52945 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
PDX1P52945 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
PDX1P52945 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
PDX1P52945 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
PDX1P52945 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PDX1P52945 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PDX1P52945 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PDX1P52945 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC16.86■□□□□ 0.29
PDX1P52945 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PDX1P52945 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PDX1P52945 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PDX1P52945 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC16.86■□□□□ 0.29
PDX1P52945 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC16.86■□□□□ 0.29
PDX1P52945 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PDX1P52945 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PDX1P52945 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
PDX1P52945 AC211486.1-202ENST00000416371 468 ntBASIC16.86■□□□□ 0.29
PDX1P52945 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC16.86■□□□□ 0.29
PDX1P52945 AC108073.2-201ENST00000464002 357 ntBASIC16.86■□□□□ 0.29
PDX1P52945 AC211476.1-201ENST00000503899 468 ntBASIC16.86■□□□□ 0.29
PDX1P52945 YBX1P5-201ENST00000509441 847 ntBASIC16.86■□□□□ 0.29
PDX1P52945 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC16.86■□□□□ 0.29
PDX1P52945 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC16.86■□□□□ 0.29
PDX1P52945 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC16.86■□□□□ 0.29
PDX1P52945 TCAP-202ENST00000578283 583 ntTSL 5 BASIC16.86■□□□□ 0.29
PDX1P52945 AC092865.6-201ENST00000642101 219 ntBASIC16.86■□□□□ 0.29
PDX1P52945 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC16.86■□□□□ 0.29
PDX1P52945 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PDX1P52945 LETM1P2-201ENST00000597330 2178 ntBASIC16.86■□□□□ 0.29
PDX1P52945 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC16.86■□□□□ 0.29
PDX1P52945 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
PDX1P52945 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC16.86■□□□□ 0.29
PDX1P52945 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
PDX1P52945 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
PDX1P52945 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
PDX1P52945 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC16.86■□□□□ 0.29
PDX1P52945 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
PDX1P52945 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
PDX1P52945 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PDX1P52945 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PDX1P52945 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC16.85■□□□□ 0.29
PDX1P52945 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PDX1P52945 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
PDX1P52945 AC134043.2-201ENST00000624206 2238 ntBASIC16.85■□□□□ 0.29
PDX1P52945 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
PDX1P52945 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
PDX1P52945 OR6D1P-202ENST00000641007 5290 ntBASIC16.85■□□□□ 0.29
PDX1P52945 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PDX1P52945 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
PDX1P52945 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC16.85■□□□□ 0.29
PDX1P52945 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PDX1P52945 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC16.85■□□□□ 0.29
PDX1P52945 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC16.85■□□□□ 0.29
PDX1P52945 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PDX1P52945 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PDX1P52945 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PDX1P52945 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
PDX1P52945 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PDX1P52945 SLC25A6P5-201ENST00000435663 894 ntBASIC16.85■□□□□ 0.29
PDX1P52945 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC16.85■□□□□ 0.29
PDX1P52945 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
PDX1P52945 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
PDX1P52945 AC019129.2-201ENST00000609837 1235 ntBASIC16.85■□□□□ 0.29
PDX1P52945 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC16.85■□□□□ 0.29
PDX1P52945 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
PDX1P52945 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
PDX1P52945 AC002310.6-201ENST00000624451 1377 ntBASIC16.85■□□□□ 0.29
PDX1P52945 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC16.85■□□□□ 0.29
PDX1P52945 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
PDX1P52945 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PDX1P52945 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
PDX1P52945 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
PDX1P52945 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
PDX1P52945 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC16.85■□□□□ 0.29
PDX1P52945 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC16.85■□□□□ 0.29
PDX1P52945 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
PDX1P52945 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PDX1P52945 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PDX1P52945 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC16.84■□□□□ 0.29
PDX1P52945 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PDX1P52945 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC16.84■□□□□ 0.29
PDX1P52945 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PDX1P52945 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
PDX1P52945 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PDX1P52945 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC16.84■□□□□ 0.29
PDX1P52945 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PDX1P52945 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
PDX1P52945 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms